Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00132 ATGGCAGAGGAAGCTCCCTTGGTAGAAATGGAGGAACAGTTGGACCTCGATGGGGACAACTACATTGAAGAGATGGACGATGAAGTTGAGGAACCATCGGAGGTGGATAGAGTGGAGGAAACTGGGGATGAACATGCTGAGGAAGAACAAGAGCCCTTGCAAACCGAGGAACACGGGAAGGATTTATCACCAGAAGCTGATGGAGATTCTAATGCTGCTGAATCTGTGGAGGATGAAGAGAAGCCTACTGCTTCCATCGATGGAGATGACAGAGAGAAGCGTGCTGAGCTTCTTGCCCTTCCTCCCCATAGGTCTGAAGTTTTCATTGGTGGGGTTCCTCGAGATGTCACAGAAGAAGATTTGAGGGGTCTTTGTGAACCGGCGGGCGAAATTGCAGAGATAAGGCTGATGAAGGATAAGGATACGGGAGAAAGCAAAGGGTATGCTTTTATAACATTCAAAACAAAGGAGTTTGCACAAAAAGCCATCGAAGAGTTCCATAATAAAGAATTCAAGGGGAGAACATTAAGGTGTTCGTTGTCTCAAGCTAAACACAGGTTGTTTATTGGCAACGTTCCGAAGAGCTGGACAGAGGAGGAGCTGAGAAGAGTCATTGAGGAGAACGGTCCTGGAATTGAAAATATTGAGCTCTTAAAGGATCCACAAAATCAAAGCCGCAACCGTGGTTTTGCTTTCGTTGAGTATTACAACAATGCCTGTGCCGACTATGCAAGACAGAAAATGTTGAACCCGAAATTTAAGCTTGATGGAAATACTCCAACTGTCAGCTGGGCTGATCCTAAGAGTGCACCTGATCCTACTGCTGTTGCTCAGGTGAAGGCTCTTTATGTGAAAAACTTGCCCGACAACACTACAACTGAACAGCTGAAGGAACTATTCCAATGCCATGGGGAGATCACAAAAGTCGTCCTGCCACCTGCTAAAGCTGGGCAGAGCAAGCGGGATTTTGGATTCATTCATTTTGCGGAGAGGTCGAGTGCATTGAAGGCTGTAAAAGAAAATGAGAAATATGAAATTGATGGACATGTCTTGGATGTCTCCCTTGCTAAGCCTCAGAATGACAAGAAGTTCGATTCAGGTTCTTATCCCTATAAACCGGGGATTCTTCCTGGTTATCTTCAACAGCCTGGTTATGGTTTTGTCAGAGATCCATATGGAGCTTTAGGTGCTGGATATGGCACGGCTACTGGATTTCAGCAGCAGCCAGTGATATACGGTAGGGGGCCAATGCCAGCAGGAATGCGAATGGTGCCAATGGTTCTACCAGACGGTCGACTTGGCTATGTTCTACAACAGCCTGGTGCAGGGGCTCCAACTCCACCACCTCGGAGGAATGATCGGAGCAGTGGCTCAGGTGGACCGCAAGGACGGGGTGGAAGTAGTGGTGGTGGTGATGACAACCGTGGCCGAAGCAGCAACAATTTTACCGGTTCCATCCCTCTCCTGCTCGGAAACTGCGGACAACTCGATACGCTTCTCCTCAACGACAATCGCTTTGAAGGACCAATCCCTCCTGAGCTTTTCCTATCCAAGCGACTTGTTCGACTCGACATGGGTTACAATTTCCTCACTGGTCGAATTCCTCCTGAGGTAAGCCTCTGTGTCGAGCTTGAATATCTTGGGTTGTATAACAATTACTTGAGTGGGGAGATTCCAAATTTGCCAAATTTGAAGTATTTGTACTTGAACACGAATAATCTAACTGGGTCTTTACCGGATTTTTCGAACTCCTGTGCAATTACTGATCTATGGGTTCATGAGAATATGTTGTCTGGATCTTTATCTCGTAGCTTGGGTAATTGCAGTAATCTTATTATGTTCTTTGCTTCCCAAAATGGTTTTGATGGAATTATACCGCCAGAGATCTTTGGAGGTCTTCTGGGACTTGAAGTTCTGTATCTTGATGGTAATGGATTTGAAGGAGAAATGCCAGAGACGTTGTGGGGTGTTGGCAATTTACAAGAGCTTGTTCTTTCAGGGAACAAACTCAATGGGAGTATACCTGAAGGGATTAGTCAATGTCAAAGATTAACTGTTATTTCTCTTGCGGAGAATCGTTTTGTGGGTCAGATTCCTCGGTCGATAGGAAGCCTTAAAGATTTGAACACTCTGCTTCTCTTTGATAACATGCTTGAAGGCTCCTTGCCACCTGAGCTTGGGAATTGCAGTTCATTGGTTGAATTAAGGCTTCAGAATAATTTTATTGAAGGACCTATTCCTCCAGAAATCTGTGAGCTTGAGAATCTTGAGGTACTTTTTTTGTTCAACAATCATCTTGAAGGCAATATTCCTCGACAGATAGGGAGACTGAAGACCCTTGCTCAGTTGGCGCTGTATAACAACAGCTTGAGTGGTTGGATTCCTACTGAGATTACCCATTTGAGAAACCTCAGGTTTCTATCTTTAGCTTACAATAATCTCACTGGGAATGTGCCATCTGAGCTTGGAAAGAACACCTTTCCGGGTTTAGTCAAACTGGACTTAAGTGGGAACTGTCTTTATGGACCGATTCCTTCTGGTCTGTGCGCAGCCAATAATCTCTCTGTTTTGGCCCTTGGGAACAACCATTTCAATGGTAGTTTTCCCGTCGAAATTGGACGATGTGCGTCACTTAGGAGGGTGATTCTTAGGAACAATCTTCTGCAAGGGAGTATAATGGGAGATTTGGATCGAAACCTCCGGATTTCTTTCTTGGACCTAAAAGGGAACTTGCTCGAAGGATGCATACCTCCAGTACTTGGGTTGTGGAGCAACCTCTCAATGCTTGATATCTCGGAGAATCACTTATCTGGGTCTATACCTCCTGAGCTTGGAAAGCTCAAGAATCTGCAAATCCTACGAATTGCTGCAAACAGACTGACAGGAAGCATACCCTCTGAGTTGGGTAATTGCACGAAAATGATCAAATTGGACCTAAGTAAGAATCATCTTTCAGGATGCATTCCTGCAAAGGTTGCAACTTCCATAGAATTGCAAAGCCTGCTTCTTGAAGAGAATGAACTTAATGGGACTGTCCCCGATTCGTTTACATCCCTCCAGAGTCTTTTTGAATTGCAACTTGGAAACAACATGCTAGAGGGTCCAATTCCTTGCAGCCTTGGTAATCTGCATCATTTTTCTTTCATTCTGAACCTTAGCAATAATATGCTAACTGGTGACATCCCTCCTTGCCTTGGCAACTTAGATAAGCTTCAGATTCTGGATCTCTCAAGCAACCATTTTTCCGGTGAGATACCATCAGAACTGAACAATATGATCTCTCTGTCCTCTGTGAACGTATCATTCAATCAGTTCTCTGGCAAGCTCCCTGTAGCTTGGACACAACTAATGGCTTCATCACTGGGATCTTTTCTTGGGAACCCGGAGTTATGTGTGCTTGGCAACAAGGCTGCATATTGTGGGGAAGCAAGAGAACAGAGTCACCACAGGACAAGAGGAGAGATGCTGGCTGGTGTGATGATCAGTATGGTTTTCTTTGTAGCAGGAATATGTGCTGTGATTTACTTTTTAGTAGTTCGAGGAGTTCGGAGACGATGGGCCACTCTTCGGGCTTTGGTTCATGATGTTAAATCAACAACAGAAGACTTACCTGAAGACCTGAAATTTGAAGACATAATGCGAGCTACTGAAGGCTTGAGTGACAAGTATGTGATTGGGAGGGGCAGGCATGGAACCGTTTACCGTACGGAGTCTGTCAACTCCAGAAAGCGTTGGGCTGTGAAGAAGGTGGATTTGTCTGAGGTGAGCTTCAGCCTCGAGATGAAGACTCTTAGTATGGTGAGGCACCGGAATTTGGTAAGAATGGCTGGTTACTGCATCAAAGATGGATTTGGTTTGATTGTGACTGAGTACATGCCTTGTGGGACACTATTTCATATCCTACACAGGAGCGAAGCCCGTATGGTATTGAACTGGAACGTTCGCCATCGAATTGCTCTGGGTATTGCCCAAGGCCTTTCGTACCTTCACCATGATTGTGTGCCACAGATCATTCATAGAGATGTTAAATCGGATAACATTTTAATGGATTCTGATCTCGAGCCGAGGATTGGAGATTTTGGAATGGCGAAGTTGGTTAGCAATTCTGATGCAGGCTTGACGAGGTCCTCAATTGTAGGAACACTTGGCTACATCGCTCCAGAAAATGGATACTCGACTCGGTTGACAGAGAAATGCGATGTGTACAGCTATGGAGTTATTTTACTAGAGCTTCTATGCAGAAAGATGCCCGTGGACCCCAGCTTTCAAGATGGCCTTGATATTGTCTCCTGGGTGAGGAATAACTTGCAGAAGGCTGACAAGTGCTGCCCTTTTTTCCTTGATGAGGAGATCAGTTTCTGGACGGAAAATGAAAGATCGAAGGCAGTGGAACTGCTTGATTTGGCACTCTCATGCACTGAATTGGTATGTGATGCAAGACCCTCAATGAGAGATACTGTAAGATATCTCATGAAGTTGAATAGTCAACAGAAGAACAATGCACACAACAAGGGAAAAGCTCTCTTAAAACACTCAAATTAA 4542 0.4491 MAEEAPLVEMEEQLDLDGDNYIEEMDDEVEEPSEVDRVEETGDEHAEEEQEPLQTEEHGKDLSPEADGDSNAAESVEDEEKPTASIDGDDREKRAELLALPPHRSEVFIGGVPRDVTEEDLRGLCEPAGEIAEIRLMKDKDTGESKGYAFITFKTKEFAQKAIEEFHNKEFKGRTLRCSLSQAKHRLFIGNVPKSWTEEELRRVIEENGPGIENIELLKDPQNQSRNRGFAFVEYYNNACADYARQKMLNPKFKLDGNTPTVSWADPKSAPDPTAVAQVKALYVKNLPDNTTTEQLKELFQCHGEITKVVLPPAKAGQSKRDFGFIHFAERSSALKAVKENEKYEIDGHVLDVSLAKPQNDKKFDSGSYPYKPGILPGYLQQPGYGFVRDPYGALGAGYGTATGFQQQPVIYGRGPMPAGMRMVPMVLPDGRLGYVLQQPGAGAPTPPPRRNDRSSGSGGPQGRGGSSGGGDDNRGRSSNNFTGSIPLLLGNCGQLDTLLLNDNRFEGPIPPELFLSKRLVRLDMGYNFLTGRIPPEVSLCVELEYLGLYNNYLSGEIPNLPNLKYLYLNTNNLTGSLPDFSNSCAITDLWVHENMLSGSLSRSLGNCSNLIMFFASQNGFDGIIPPEIFGGLLGLEVLYLDGNGFEGEMPETLWGVGNLQELVLSGNKLNGSIPEGISQCQRLTVISLAENRFVGQIPRSIGSLKDLNTLLLFDNMLEGSLPPELGNCSSLVELRLQNNFIEGPIPPEICELENLEVLFLFNNHLEGNIPRQIGRLKTLAQLALYNNSLSGWIPTEITHLRNLRFLSLAYNNLTGNVPSELGKNTFPGLVKLDLSGNCLYGPIPSGLCAANNLSVLALGNNHFNGSFPVEIGRCASLRRVILRNNLLQGSIMGDLDRNLRISFLDLKGNLLEGCIPPVLGLWSNLSMLDISENHLSGSIPPELGKLKNLQILRIAANRLTGSIPSELGNCTKMIKLDLSKNHLSGCIPAKVATSIELQSLLLEENELNGTVPDSFTSLQSLFELQLGNNMLEGPIPCSLGNLHHFSFILNLSNNMLTGDIPPCLGNLDKLQILDLSSNHFSGEIPSELNNMISLSSVNVSFNQFSGKLPVAWTQLMASSLGSFLGNPELCVLGNKAAYCGEAREQSHHRTRGEMLAGVMISMVFFVAGICAVIYFLVVRGVRRRWATLRALVHDVKSTTEDLPEDLKFEDIMRATEGLSDKYVIGRGRHGTVYRTESVNSRKRWAVKKVDLSEVSFSLEMKTLSMVRHRNLVRMAGYCIKDGFGLIVTEYMPCGTLFHILHRSEARMVLNWNVRHRIALGIAQGLSYLHHDCVPQIIHRDVKSDNILMDSDLEPRIGDFGMAKLVSNSDAGLTRSSIVGTLGYIAPENGYSTRLTEKCDVYSYGVILLELLCRKMPVDPSFQDGLDIVSWVRNNLQKADKCCPFFLDEEISFWTENERSKAVELLDLALSCTELVCDARPSMRDTVRYLMKLNSQQKNNAHNKGKALLKHSN* 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00132 1513 CDD RRM_SF 107 179 - -
Eupl08g00132 1513 SUPERFAMILY RNI-like 478 699 - -
Eupl08g00132 1513 FunFam Serine/threonine-protein kinase-like protein CCR4 1292 1508 - -
Eupl08g00132 1513 Gene3D - 22 185 IPR012677 -
Eupl08g00132 1513 SMART rrm1_1 106 179 IPR000504 GO:0003723
Eupl08g00132 1513 SMART rrm1_1 281 354 IPR000504 GO:0003723
Eupl08g00132 1513 SMART rrm1_1 186 263 IPR000504 GO:0003723
Eupl08g00132 1513 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 477 558 - -
Eupl08g00132 1513 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 185 267 IPR000504 GO:0003723
Eupl08g00132 1513 Gene3D - 270 386 IPR012677 -
Eupl08g00132 1513 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 187 250 IPR000504 GO:0003723
Eupl08g00132 1513 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 107 177 IPR000504 GO:0003723
Eupl08g00132 1513 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 282 351 IPR000504 GO:0003723
Eupl08g00132 1513 Gene3D Phosphorylase Kinase; domain 1 1185 1291 - -
Eupl08g00132 1513 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 105 183 IPR000504 GO:0003723
Eupl08g00132 1513 Gene3D Ribonuclease Inhibitor 827 1140 IPR032675 -
Eupl08g00132 1513 Gene3D Ribonuclease Inhibitor 561 737 IPR032675 -
Eupl08g00132 1513 SMART LRR_typ_2 827 851 IPR003591 -
Eupl08g00132 1513 SMART LRR_typ_2 801 825 IPR003591 -
Eupl08g00132 1513 SMART LRR_typ_2 1068 1092 IPR003591 -
Eupl08g00132 1513 SMART LRR_typ_2 947 971 IPR003591 -
Eupl08g00132 1513 SMART LRR_typ_2 657 681 IPR003591 -
Eupl08g00132 1513 SMART LRR_typ_2 705 729 IPR003591 -
Eupl08g00132 1513 SMART LRR_typ_2 633 656 IPR003591 -
Eupl08g00132 1513 SMART LRR_typ_2 753 777 IPR003591 -
Eupl08g00132 1513 SMART LRR_typ_2 561 583 IPR003591 -
Eupl08g00132 1513 MobiDBLite consensus disorder prediction 75 92 - -
Eupl08g00132 1513 Pfam Protein kinase domain 1222 1487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00132 1513 MobiDBLite consensus disorder prediction 51 67 - -
Eupl08g00132 1513 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 186 266 - -
Eupl08g00132 1513 Gene3D - 186 266 IPR012677 -
Eupl08g00132 1513 Gene3D Ribonuclease Inhibitor 478 560 IPR032675 -
Eupl08g00132 1513 SMART rrm2_1 106 179 IPR003954 GO:0003676
Eupl08g00132 1513 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 280 358 IPR000504 GO:0003723
Eupl08g00132 1513 SUPERFAMILY RNA-binding domain, RBD 185 361 IPR035979 GO:0003676
Eupl08g00132 1513 FunFam Leucine-rich repeat family protein 858 1143 - -
Eupl08g00132 1513 Gene3D Transferase(Phosphotransferase) domain 1 1292 1511 - -
Eupl08g00132 1513 SUPERFAMILY RNI-like 826 1117 - -
Eupl08g00132 1513 Gene3D Ribonuclease Inhibitor 738 826 IPR032675 -
Eupl08g00132 1513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1337 1349 IPR008271 GO:0004672|GO:0006468
Eupl08g00132 1513 MobiDBLite consensus disorder prediction 1 92 - -
Eupl08g00132 1513 FunFam Heterogeneous nuclear ribonucleoprotein Q isoform A 11 185 - -
Eupl08g00132 1513 SUPERFAMILY L domain-like 625 891 - -
Eupl08g00132 1513 MobiDBLite consensus disorder prediction 435 480 - -
Eupl08g00132 1513 ProSiteProfiles Leucine-rich repeat profile. 543 565 IPR001611 GO:0005515
Eupl08g00132 1513 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 617 857 - -
Eupl08g00132 1513 ProSitePatterns Protein kinases ATP-binding region signature. 1225 1249 IPR017441 GO:0005524
Eupl08g00132 1513 MobiDBLite consensus disorder prediction 1 50 - -
Eupl08g00132 1513 SUPERFAMILY Protein kinase-like (PK-like) 1206 1493 IPR011009 -
Eupl08g00132 1513 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 725 1491 - -
Eupl08g00132 1513 SUPERFAMILY RNA-binding domain, RBD 101 184 IPR035979 GO:0003676
Eupl08g00132 1513 SMART serkin_6 1219 1490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00132 1513 CDD STKc_IRAK 1225 1493 - -
Eupl08g00132 1513 ProSiteProfiles Protein kinase domain profile. 1219 1493 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00132 Eupl-Chr8 2545147 2556335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00132 478 892 Receptor kinase-like Gene Family AT1G17750 36.105 1.18e-51 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl08g00132 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00132 - - qlo:115960934 1405.96