Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00127 ATGATCATGGAAACCGAAACCAATACTGGGTTTGGTTCAGACAAAGCAACAGTGGTGAGTGATGGGGGTGGTTTGGGTCTGAAACTGCAACGTACTGAATCCTTCCCATATAAGATGATGATGACGATGCATCATCACCGTCCGTTTGAGGGGGGTAGTGGTGGACCCACTTTTTATAACGGAATCAATGAAGGGAGCAGGTCTATGAATGATATATACGATGTTGTTGCCGTTGGTGGTGGTGGTGGTGCAGTGGCAAGGACTCTGCAGCCTTTTAACACTGCCTTCAAATCCCCAGGAGGGATGGCAGCATCTCTGAGGTTTCCTTTTACATCCGCTCAGTGGCAGGAGCTTGAACGACAGGCTTTGATCTACAAGTACATGATGGCTTCTGCGCCTATTCCACCTGATCTTCTCATACCCATCAGCAGAAATTTCTCAGACACTGCTGCTTCCCACTCTACTCTGGGTCGAGGTTCTTGTTTCAATCTACGGTTCTCGAACAACACGGATCCTGAACCAGGGAGGTGCCGAAGAACGGATGGGAAGAAATGGCGGTGTTCTAGAGATGTGGCGCCTGATCAGAAATACTGTGAACGACACATGCACAGAGGTCGCCCCCGTTCAAGAAAGCCTGTGGAAGTACATGCCGAGATTAACAACAACAACAACAGCAACATTACTCGCTCTGTTCCTCCAACGACAATCACAGCAAATAACAGTAGTACATCTTCTCATCATCTCGGAGCTACGAGACCCTATCACCAGTCTTCTGGATTTCTTGCTAAACCTGATTTCAAGGTCCCTTCTCTCGCAACCATGGCATCTGCTACAGCTTACAAGGAACCCAGGTACATGGAGTGGATGGTAAAAGGAGAAACAGCTCCCATGGCCGCATCGAACCAGCAATGGCAGCAGTTAATGCAGTCGAAAGTAGGATTGAAGACGGACAGCAGCAACTGTAATGCAAACATGAATACCCCTGTTTTTCAGTATCAAGACAACCTGAATTTGAACTCATATACAGAATTTGGTTCTGGAGAAGGCTCAGGATCTCAGCAACAACAAAATGATCAGTCCTGCTTGTTTTTCAACCCTGAATTAGCCTCCTTAGAAAACCCCGTGAGTTCCGATCAGAGACAGGTGCCACGAAGGTTGATCGACGCCTGGTCGACTGCAAATGCAAGGGATAACCCCAAAGAGACCAACAATTCCTCCGTTTCTTCAAATGGGAAGCTACCACTGTCCACACTAACTCTGTCAATGTCTGGTGGCAATGGCACTGGAGAAGACATGAATCAAATCCAGATGGGTCTTGGGGTTATTGATTCTGATCGAGACAATGGTGGGGGTGTTAAGTCTCAACCTTTAAGCTGGATGACCCCTGCTTCTTGGATAGCTTCACCGCCGGGCGGACCTTTAGCCGAAGTCCTACAATCAAGCACCACTGCTGCGGCAGCGGGGTCTAATTCAGCTTCTCCTCATGCTTGCAGTAGTACCACTAGCAAGAGCTCCTCCAGTGGTGGGGGACTGAATTTGATGACTGATGGTTGGGGAGGTAGTGCTGATGCTAGTAGCCCCTTAGCAACTACGGTTTCATCTCCTTCTGGTGTCCTGCAGAAGGCCCTTGCCTCGCTCTCGGATAGCAGTGGTAGCAGCAGCCCAACGTTCACAGCTGCTACTGCTGCTGCGAAATCGGAAATTGCTCTCCAATGGATGAAACAGAGCAAATTACCATATTCTTCTTGA 1749 0.4866 MIMETETNTGFGSDKATVVSDGGGLGLKLQRTESFPYKMMMTMHHHRPFEGGSGGPTFYNGINEGSRSMNDIYDVVAVGGGGGAVARTLQPFNTAFKSPGGMAASLRFPFTSAQWQELERQALIYKYMMASAPIPPDLLIPISRNFSDTAASHSTLGRGSCFNLRFSNNTDPEPGRCRRTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKPVEVHAEINNNNNSNITRSVPPTTITANNSSTSSHHLGATRPYHQSSGFLAKPDFKVPSLATMASATAYKEPRYMEWMVKGETAPMAASNQQWQQLMQSKVGLKTDSSNCNANMNTPVFQYQDNLNLNSYTEFGSGEGSGSQQQQNDQSCLFFNPELASLENPVSSDQRQVPRRLIDAWSTANARDNPKETNNSSVSSNGKLPLSTLTLSMSGGNGTGEDMNQIQMGLGVIDSDRDNGGGVKSQPLSWMTPASWIASPPGGPLAEVLQSSTTAAAAGSNSASPHACSSTTSKSSSSGGGLNLMTDGWGGSADASSPLATTVSSPSGVLQKALASLSDSSGSSSPTFTAATAAAKSEIALQWMKQSKLPYSS* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00127 582 ProSiteProfiles WRC domain profile. 171 215 IPR014977 -
Eupl08g00127 582 MobiDBLite consensus disorder prediction 485 512 - -
Eupl08g00127 582 SMART QLQ_2 108 144 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl08g00127 582 MobiDBLite consensus disorder prediction 390 433 - -
Eupl08g00127 582 Pfam QLQ 109 142 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl08g00127 582 MobiDBLite consensus disorder prediction 485 514 - -
Eupl08g00127 582 PANTHER GROWTH-REGULATING FACTOR 5 91 422 IPR031137 GO:0005634|GO:0006351|GO:0032502
Eupl08g00127 582 MobiDBLite consensus disorder prediction 395 433 - -
Eupl08g00127 582 ProSiteProfiles QLQ domain profile. 109 144 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl08g00127 582 Pfam WRC 172 214 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00127 Eupl-Chr8 2488934 2491682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00127 79 313 GRF Transcription Factor Family AT4G24150 40.081 7.88e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Eupl08g00127 WRC 1.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00127 - - nnu:104593690 555.829