Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00126 ATGGGGAAAAAGGGAGGAACCTCGTGGTTGACTGCAGTGAAAAGGGCTTTCAGATCTCCTACTAAGAAGAACGACAAGAATAGCAGAAGGAGCGAAGAACATGAGCAAGAAGAAGAAGAAGAAAAGAGGGAGAAACGAAGATGGATCTTTCGGAAAACTTCGAATCACGATTCCGTAATACAAAAACAATGCGAAGCGCAGACGACTACAACGATAAATCCCGTCTCAGAGGCCGTGGCAGCCGAGAAAAGGCACGCTATTGCCGTCGCTGTAGCGACCGCAGCAGCTGCAGAAGCGGCGGTGGCGACTGCCAAAGCAGCGGTGGAGGTGGTTCGGCTAACCAGGCCTTCTAATTTCGTTAGAGAACAATACTCAGCTGTTGTGATTCAAACGGCTTTCAGAGGATATCTGGCAAGAAGAGCTCTTCGAGCACTTAAAGGGATTGTAAAGCTGCAAGCTTTGGTGAGAGGACGCAATGTTCGAAAGCAAGCGAAGATGACTCTTCAGTGCATGCAAGCTCTGGTTCGAGTACAGGCTCGGGTGAGGGATCAACGTATGAGGCTTTCGATTGATGGGAGCAGAAGGTCCACCATTAGCGACACTAACAGCTTGTGGGAGTCGAGATATCTCCAGGATATTGCAGAGAGGAAGTCCATCTCGAGAGATGGAAGTAGCATTGCAGAAGAGTGGGACGACCGCCCACATACACTTGAGGAGATCCAAGCCATTTTGCAGAGTAAGAACGACGCAGCTTTAAAGCGTGAAAAAGCCCTCGCTTACGCCGCTTCTCATCAGACACGGAGATCCAGTAGGAACCCATTAGCTGGAGATGAAGAAGAGCTTGAGGAGAGACCAAAATGGCTTGATCGATGGATGGCGACGAAGCCATGGGAGAACAGGGGAAGAGCCTCCACGGATCAAAGAGAACCCATTAAAACCGTTGAAATTGACACCTCTCGACCTTACTCTTACTCAGCTCCCAGCTTCATCAGATCACAACGACAAGACCATCATCATCATCATCAACAACAACCCAGTTCACAGTCTGTTGCTTCTCCTCGCCAGAGAACTCAGCCCCTGAATCAGTTTCCTGTCACGCCCTCACCCTCCAAATCACGGCCTCTACAAGTACGTTCGGCGAGCCCTCGTTGCTTGAGAGAAGAACGAGGCTACCCAACAGCCCACACGCCGAAATCGGGTTTTTACTACAATGGTGGTCATCGTTGTGGTGCTGGTGTTGCTGCATTGCCGAATTACATGGCAGCAACTGAGTCGGCAAAAGCTCGGGTGAGATCCCAGAGCGCGCCGAGGCAAAGGCCATCGACGCCTGAGAGAGAACGAGTTGGCTCGGTGAAGAAACGACTTTCGTTTCCAGTTCCCGATCCTTACAGTGGGGTTGGAGGGGGTGGTGGGTTTGGTCAGAACTTGAGGAGCCCAAGCTTTAAGAGCGTTCACGTTCATGGAGGGTATTTTGGTACGGAGCAACGGTCGAATTTGTCTTCTTGTTGTACGGACAGCCTTGGTGGTGAGATCTCTCCTTCTTCAACTAGTGATCTGAGGAGGTGGTTAAGGGATCCAGCCCAGGACACTGGGGACAGTCAAGCCCAATGA 1611 0.5096 MGKKGGTSWLTAVKRAFRSPTKKNDKNSRRSEEHEQEEEEEKREKRRWIFRKTSNHDSVIQKQCEAQTTTTINPVSEAVAAEKRHAIAVAVATAAAAEAAVATAKAAVEVVRLTRPSNFVREQYSAVVIQTAFRGYLARRALRALKGIVKLQALVRGRNVRKQAKMTLQCMQALVRVQARVRDQRMRLSIDGSRRSTISDTNSLWESRYLQDIAERKSISRDGSSIAEEWDDRPHTLEEIQAILQSKNDAALKREKALAYAASHQTRRSSRNPLAGDEEELEERPKWLDRWMATKPWENRGRASTDQREPIKTVEIDTSRPYSYSAPSFIRSQRQDHHHHHQQQPSSQSVASPRQRTQPLNQFPVTPSPSKSRPLQVRSASPRCLREERGYPTAHTPKSGFYYNGGHRCGAGVAALPNYMAATESAKARVRSQSAPRQRPSTPERERVGSVKKRLSFPVPDPYSGVGGGGGFGQNLRSPSFKSVHVHGGYFGTEQRSNLSSCCTDSLGGEISPSSTSDLRRWLRDPAQDTGDSQAQ* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00126 536 MobiDBLite consensus disorder prediction 18 45 - -
Eupl08g00126 536 PANTHER IQ-DOMAIN 5-RELATED 1 458 - -
Eupl08g00126 536 Pfam Protein of unknown function (DUF4005) 381 470 IPR025064 -
Eupl08g00126 536 MobiDBLite consensus disorder prediction 260 283 - -
Eupl08g00126 536 MobiDBLite consensus disorder prediction 492 536 - -
Eupl08g00126 536 ProSiteProfiles IQ motif profile. 122 150 IPR000048 GO:0005515
Eupl08g00126 536 Coils Coil 24 44 - -
Eupl08g00126 536 SMART iq_5 121 143 IPR000048 GO:0005515
Eupl08g00126 536 SMART iq_5 144 165 IPR000048 GO:0005515
Eupl08g00126 536 MobiDBLite consensus disorder prediction 344 377 - -
Eupl08g00126 536 MobiDBLite consensus disorder prediction 298 315 - -
Eupl08g00126 536 MobiDBLite consensus disorder prediction 493 521 - -
Eupl08g00126 536 MobiDBLite consensus disorder prediction 427 462 - -
Eupl08g00126 536 FunFam IQ-domain 11 121 172 - -
Eupl08g00126 536 MobiDBLite consensus disorder prediction 1 45 - -
Eupl08g00126 536 Pfam IQ calmodulin-binding motif 125 143 IPR000048 GO:0005515
Eupl08g00126 536 Pfam IQ calmodulin-binding motif 146 165 IPR000048 GO:0005515
Eupl08g00126 536 ProSiteProfiles IQ motif profile. 146 173 IPR000048 GO:0005515
Eupl08g00126 536 MobiDBLite consensus disorder prediction 298 398 - -
Eupl08g00126 536 Gene3D - 121 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00126 Eupl-Chr8 2480291 2482750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00126 9 524 IQD Protein Family AT4G00820 54.973 1.13e-172 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00126 - - nnu:104604661 687.952