Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00124 ATGTCAGACGACATGAGTCTCTCAGTTAACGGACAGTCTCAGGTCCCTCCCGGCTTCCGTTTTCATCCAACCGAAGAGGAGCTTTTGCACTACTACTTGAAGAAGAAAGTGGCGTACGAAAAGATCGACTTGGATGTAATTCGAGACGTCGATCTTAATAAGCTCGAGCCATGGGATATACAAGAGAAGTGCAAAATAGGATCCACCCCTCAAAATGACTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCAACGGGGACTCGGACAAACCGTGCAACAGCTGCCGGATTCTGGAAAGCAACGGGCCGTGATAAGGTCATCTATAGTAGCTTTAAACGAATTGGAATGAGGAAGACTCTAGTGTTTTATAAGGGTAGAGCCCCACACGGCCAGAAATCCGACTGGATTATGCATGAATACAGACTCGACGACAACACTACTGATACCAACGTCTCTAATTCAATGGGAGACGCAACCCAGGAAGATGGTTGGGTGGTCTGCCGTGTTTTCAAGAAGAAAAACCATCACAAATCTCTGGACAGCCCAAACAGTTCATCAATGACAGCCAATACAAAGACCCAGATGCTCAATTCGAGTAACGATGGAGCCTTGGACCAGATTCTTCAGTACATGGGTAGGACTTGCAAGCAGGAATCCGAAACAAGCAACAATATCAGCATCACCACCAACAACAACAATGTGAGATTTCTCAGGTCATTCGAGACGGCAATCGGCAACGGATTCCACGAAAGATTCATGCAACTTCCGGCACTAGAGAGCCCAACTCTCCAATCACTTTCGAACGACTGCGCACGGCTCGATCAAGCCTGTAGTAGCCAAACTTGTTATCAACCTATTGATGTACAGGTGATCACAGACACTGAAGCTTCTATCATCAAACAAGGCAATAAAAATCTGAACCCGGTTTACCAGACGGACACCGGTCTCAACGACTGGGCCGCCTTAGACCGGCTTGTCGCCTCCCACCTGAATGGCCAAGTCGAGACATCCAAACAACTTGCTTGCTTTAACGACCCAAATCTTGCCTTCTGCCCTACCCATGATCATGATCTCCAATTACCACAACTTCGATCGGCTGCTAACAGATTATATCATAGCTCCCAAGACTATAACAGCGAAATCGATCTATGGAGCTTCAACCCATCGTTGTCGTCATCTTCAGACCCACTATGTCACGTGTCGAACTCCTCTGTATAA 1221 0.4701 MSDDMSLSVNGQSQVPPGFRFHPTEEELLHYYLKKKVAYEKIDLDVIRDVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSSFKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTDTNVSNSMGDATQEDGWVVCRVFKKKNHHKSLDSPNSSSMTANTKTQMLNSSNDGALDQILQYMGRTCKQESETSNNISITTNNNNVRFLRSFETAIGNGFHERFMQLPALESPTLQSLSNDCARLDQACSSQTCYQPIDVQVITDTEASIIKQGNKNLNPVYQTDTGLNDWAALDRLVASHLNGQVETSKQLACFNDPNLAFCPTHDHDLQLPQLRSAANRLYHSSQDYNSEIDLWSFNPSLSSSSDPLCHVSNSSV* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00124 406 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 220 - -
Eupl08g00124 406 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Eupl08g00124 406 Gene3D NAC domain 24 178 IPR036093 GO:0003677|GO:0006355
Eupl08g00124 406 SUPERFAMILY NAC domain 7 173 IPR036093 GO:0003677|GO:0006355
Eupl08g00124 406 ProSiteProfiles NAC domain profile. 15 173 IPR003441 GO:0003677|GO:0006355
Eupl08g00124 406 FunFam NAC domain-containing protein 24 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00124 Eupl-Chr8 2453509 2455072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00124 1 405 NAC Transcription Factor Family AT2G46770 53.664 8.69e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl08g00124 NAM 2.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00124 - - nnu:104593707 569.311