Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00095 ATGGGGGAAGTGGAAGTTGTTGTGAGTAGTGAAGACGAGATGGAGGTGGTGTTGCATGAGGAGGAAGAAGAGAGGGGGAAGAAGAAGAAGGAGAGTTCAACAAGTGTGATTAGATGGGAGAGTTTTCTTCCTAGGATGTTTATCAGAGTTCTGTTGGTTGAATCCGATGATTCCACTCGGCAGATCATCGCCGCACTTCTCCGTAAATGCAGTTACAAAGTTGCAGCAGTTCCTGATGGATTAAAGGCATGGGAAACACTGAAGGAAAGACCCCAGAGCATAGACCTTGTCTTGACAGAAGTGGAATTGCCGTCAATATCTGGATTTTCTCTTCTTACCATGATAATGGAGCATGATATCTGCAAACACATTCCTGTTATAATGATGTCCTCGCATGATTCTGTTGGAATGGTTTTCAAATGCATGTTGAGAGGTGCTGCTGACTTTCTTGTGAAGCCTGTTAGGAAAAATGAATTGAGGAATTTGTGGCAGCATGTTTGGAGAAGGCATTCTTCTAGTGGTGGTGGACTTGGTCACCAAGATGGGAGCCCTGCGCAACAAAAAGGTGAAGCTATTTCGGTAAACAATGCTGCGAGTAATCACTCAAGCGATTATGTGGCATCTGTACAGAAAAATAAGGAATGTACTGAGAAAGGGAGCGATGCTCAAAGCTCTTGTACAAAGCCAGACATGGAAGCTGAGAGTGCATTCGTGCAAAATATGCAGGATCTGTTGCAGCCAGAATGTAGGAGTCCCTCTTTTATGAGTAACACAAAAACACAGAAGCATAAAGAGTGTGTTAAATTGGATGAGAAATTGTCTATGCATGAGAGTGAAGCAGAAGACAAATCAAGTAGATTGGGATCTGAGGTGGCACCCTGCAACAACGCTAATGAATCAATGGGGATAAATGTAGAAAAAGGACATGCTTCTGCAAGAACAATGACTCAGAGCGAGGATGTGGCACAAGAAAGTCGCAGGAAGGATACTAATATCTCTAGGGAGACTGACAACAATAATGATCAGGTCAAGCCTTCTAGAGTAGCCATCGACTTGATTGGAGCATTTGATAGATGCCTGTACGCATACAACACTGTTGGTCAAGAAGTTTTGTTCAATTATGCAAAAACTCACTGTGATTCAAATGATGCCACAAACAAGTTGAGTTCGAGTCCACTATTGGAGCTTTCGTTAAAACGATCCCATCCTAGTGACTGTGATATCCAACGGACTGATGAAAAGAATACGTTGAACCATTCGAATGCCTCACCCTTTTCACGGTACAATAACAGGACAATGCAACCCCTCATTCCAACATCGGCCATTTTTCACACCGAACAAAATAATTCTTATAAACATCTTTCGAATCAAGGCCCTGTTAATGCTGCTGATGCTCCTCAATGGAATGGTGCTCCATTGAACAATAACCAGGAAAGAATGACCTCTGTGGTTGTTGGTCAACCTGGTCAAGCTGAAAGTGCATTTCCATGCCCTCAACTTGGGGCCATTCCTGTCCCTGTTCCAGTCAGAGGCATAAGGTTTGATACTGTATGTTCTGGCTACGGTGGTGTCTTGCCACCTGTATTTTATGCACAATCAGGCCCACAGCCACTGTGGAGTCAACATTCAGCCAGCCAGCAGGAGTCCGCCATTCAAGTAAATTCATCTCATCAGTCCAATCCTGAACCTCACAACTTTGAGCAAGGTTGTAGCCTGCATGATCAAAATGCCAACCACTCCACTAGCCAAACTGTGCACAAGCTGCTGGAGCAGAATACGGAATCTGTGGAGGATCCATTACGTTTTTCACCTGCCACTGGTCAGAGTGCAACTAGTAGTTTATGTAATGGTGCTGCAAGTCATCTCAACAGCAGCGGATGTGGGAGCGTTTGCAATGGAAGTAATGGGAATGTCACTCCAGCTGCTGTTACCAGGACCACTTCAGAGAGTGGGAATGACGAAGGCCTCTTCGTTCACGATGGAATCATAGGGATGGATTCTCACCGCTACACCCAAAGAGAAGCGGCTCTAAACAAGTTCCGGTTGAAGCGGAAAGATCGATGCTACGAAAAAAAGGTTCGATACCAAAGCAGGAAAAGACTTGCAGAGCAGCGTCCGAGAGTGAAGGGACAGTTTGTTCGTCAAGTACCAGCTTACCCTCCAACTGAAACCGATCAATACTATGGTTCATTGGTTGCATAG 2202 0.4478 MGEVEVVVSSEDEMEVVLHEEEEERGKKKKESSTSVIRWESFLPRMFIRVLLVESDDSTRQIIAALLRKCSYKVAAVPDGLKAWETLKERPQSIDLVLTEVELPSISGFSLLTMIMEHDICKHIPVIMMSSHDSVGMVFKCMLRGAADFLVKPVRKNELRNLWQHVWRRHSSSGGGLGHQDGSPAQQKGEAISVNNAASNHSSDYVASVQKNKECTEKGSDAQSSCTKPDMEAESAFVQNMQDLLQPECRSPSFMSNTKTQKHKECVKLDEKLSMHESEAEDKSSRLGSEVAPCNNANESMGINVEKGHASARTMTQSEDVAQESRRKDTNISRETDNNNDQVKPSRVAIDLIGAFDRCLYAYNTVGQEVLFNYAKTHCDSNDATNKLSSSPLLELSLKRSHPSDCDIQRTDEKNTLNHSNASPFSRYNNRTMQPLIPTSAIFHTEQNNSYKHLSNQGPVNAADAPQWNGAPLNNNQERMTSVVVGQPGQAESAFPCPQLGAIPVPVPVRGIRFDTVCSGYGGVLPPVFYAQSGPQPLWSQHSASQQESAIQVNSSHQSNPEPHNFEQGCSLHDQNANHSTSQTVHKLLEQNTESVEDPLRFSPATGQSATSSLCNGAASHLNSSGCGSVCNGSNGNVTPAAVTRTTSESGNDEGLFVHDGIIGMDSHRYTQREAALNKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQVPAYPPTETDQYYGSLVA* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00095 733 MobiDBLite consensus disorder prediction 203 230 - -
Eupl08g00095 733 CDD psREC_PRR 50 153 - -
Eupl08g00095 733 PANTHER TWO-COMPONENT RESPONSE REGULATOR 49 339 IPR045279 GO:0009736
Eupl08g00095 733 ProSiteProfiles Response regulatory domain profile. 49 167 IPR001789 GO:0000160
Eupl08g00095 733 Pfam CCT motif 673 715 IPR010402 GO:0005515
Eupl08g00095 733 SMART REC_2 48 163 IPR001789 GO:0000160
Eupl08g00095 733 ProSiteProfiles CCT domain profile. 673 715 IPR010402 GO:0005515
Eupl08g00095 733 MobiDBLite consensus disorder prediction 536 583 - -
Eupl08g00095 733 Gene3D - 46 287 - -
Eupl08g00095 733 MobiDBLite consensus disorder prediction 309 342 - -
Eupl08g00095 733 Pfam Response regulator receiver domain 50 161 IPR001789 GO:0000160
Eupl08g00095 733 MobiDBLite consensus disorder prediction 320 335 - -
Eupl08g00095 733 SUPERFAMILY CheY-like 48 171 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00095 Eupl-Chr8 2002785 2010777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00095 649 716 Response Regulator Gene Family AT5G24470 66.176 5.87e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Eupl08g00095 Response_reg 6.5e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00095 K12130 - nnu:104593369 769.229