Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00078 ATGCGGCCGTCCTATCCAGGTGTGGAACATGTTGGAGGAGATATGTTTGCGAGCGTTCCCAAAGGAGAGGCCATTTTCATGAAGTGGATACTTCATGATTGGAGCGATGAACGTTGCTTGACGTTATTGAAGAATTGTTATGAAGCACTACCTGATCATGGAAAAGTGATCGTCGTGGAGGCTATTCTTCCGGTAGCTCCTGAGACAAATGCTGCTGCGAAAGGCCTGTGCCAAATTGACCTTATCATGATGACACAAAACCCTGGAGGAAAGGAAAGGACAGAGAAAGAATTCGAGGCCTTGGTAAAGGAAGCTGGATTTGCTGGTATTAAACTTGTGTGTTGTGTCTGTAACTATTGGGTCATGGAGCTATATAAAAAAGTTTGA 387 0.4444 MRPSYPGVEHVGGDMFASVPKGEAIFMKWILHDWSDERCLTLLKNCYEALPDHGKVIVVEAILPVAPETNAAAKGLCQIDLIMMTQNPGGKERTEKEFEALVKEAGFAGIKLVCCVCNYWVMELYKKV* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00078 128 Gene3D Vaccinia Virus protein VP39 3 116 IPR029063 -
Eupl08g00078 128 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 124 IPR029063 -
Eupl08g00078 128 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 126 IPR016461 GO:0008168
Eupl08g00078 128 PANTHER O-METHYLTRANSFERASE 8 111 IPR016461 GO:0008168
Eupl08g00078 128 Pfam O-methyltransferase domain 6 108 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00078 Eupl-Chr8 1784065 1785221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00078 3 128 Monolignol Biosynthesis Gene Families AT5G54160 62.698 9.15e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00078 K13066 - rvl:131312075 206.838