Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00077 ATGGGTTCAGTAGAAAACCAGTTCAAAGCAAGCAATGAAGAGGAAGACTGTTTGTTCGCCATGCAGTTGGTGTGTTCTTCGGTCATGCCCATGGTTTTGCAAGCAGCTATTGAGCTTGACGTGCTCGAAATCATAGGTAGAGCAGGCCCAGGCGTCCATCTCTCCTCTTCAGAGATAGCATCTCATCTCCCAACTAAAAACCCACAAGCCCCTGCTATGCTTGATCGTGTCCTGCGACTTTTGGCTAGCTTCAATGTGCTCACTTCCTCTCTCCGTACCCATGACGATGGCCGGGTCGAAAGGCTATATGGGTTGGCATCCGTTTGCAGATTCCTCATTCGTAATGAAGATGGAGTTTCATTGGCTCCCTTGATGCTCTTGAATCAAGACAAGATCTTCTTGCAGAGCTGGTACTACCTGAAAGATGCAATTCTTGATGGAGGAATTCCGATTAACAAGGTTTACGGATTGCACGCATTTGAGTACACTGGTATAGACCCTAGAATCAATGTGCTTCTTAATGGAGCAATGTTCAATCACACCACCATTGTCATGAAGAAGATTCTTGAGAATTACAAGGGTTTTGAAGGTTTGAATACGATGGTTGATGTCGGCGGTGGAGTCGGAACCACACTTAGCTTAATCACATCCAAGTATCCATCAATTACCGGTATTAACTTCGATTTGCCTCATGTGATCAAAGATGCCCCATCTTATCCTGGTGTGAAGCATGTTGAGGGAGATATGTTTGTAAGTGTTCCAAAGGGAGACATCATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAACAATGCTTGAAGTTATTGAAGAATTGCTATGAGGCAGTACCGGAAAATGGGAAGGTAGTCGTCGTGGAGGCAATGCTTACAGTAGCTCCTGAGGCTAGTACTGCTGCGAAATCCCTCTGTCAGCTTGATCTGATTATGTTGACTCAAGATCCTGGAGGAAAGGAGCGGACAGAGGAAGAATTCGAAGCCTTGGCGAAGGGAGCCGGATTTGCCGGCATTAGACTTGTGTGCTGTAGTTATAACTATTGGGTTATGGAATTCTATAAAAATATGTAA 1089 0.4472 MGSVENQFKASNEEEDCLFAMQLVCSSVMPMVLQAAIELDVLEIIGRAGPGVHLSSSEIASHLPTKNPQAPAMLDRVLRLLASFNVLTSSLRTHDDGRVERLYGLASVCRFLIRNEDGVSLAPLMLLNQDKIFLQSWYYLKDAILDGGIPINKVYGLHAFEYTGIDPRINVLLNGAMFNHTTIVMKKILENYKGFEGLNTMVDVGGGVGTTLSLITSKYPSITGINFDLPHVIKDAPSYPGVKHVEGDMFVSVPKGDIIFMKWILHDWSDEQCLKLLKNCYEAVPENGKVVVVEAMLTVAPEASTAAKSLCQLDLIMLTQDPGGKERTEEEFEALAKGAGFAGIRLVCCSYNYWVMEFYKNM* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00077 362 FunFam Caffeic acid O-methyltransferase 113 360 - -
Eupl08g00077 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 359 IPR029063 -
Eupl08g00077 362 SUPERFAMILY "Winged helix" DNA-binding domain 12 116 IPR036390 -
Eupl08g00077 362 Pfam O-methyltransferase domain 137 342 IPR001077 GO:0008171
Eupl08g00077 362 PANTHER O-METHYLTRANSFERASE 21 358 IPR016461 GO:0008168
Eupl08g00077 362 CDD AdoMet_MTases 200 293 - -
Eupl08g00077 362 Gene3D - 2 112 IPR036388 -
Eupl08g00077 362 Gene3D Vaccinia Virus protein VP39 113 360 IPR029063 -
Eupl08g00077 362 PIRSF O-mtase 2 360 IPR016461 GO:0008168
Eupl08g00077 362 Pfam Dimerisation domain 31 82 IPR012967 GO:0046983
Eupl08g00077 362 FunFam Caffeic acid 3-O-methyltransferase 2 112 - -
Eupl08g00077 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 360 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00077 Eupl-Chr8 1766649 1770747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00077 12 362 Monolignol Biosynthesis Gene Families AT5G54160 61.254 9.95e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00077 K13066 - nnu:104585771 524.242