Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00076 ATGGGTTCGACTCAAAACCAGATAAAAAACACCGCGGAAGAGGAGGAGGAAGCTTGCATGTTTGCCATGCAATTGGCTAGCGCCTCGGTCCTACCCATGGTCTTAAAAGCAGCCATAGAGCTTGACCTGCTCGAGATCATTGCTAAAGCAGGCCCGGGTGCGCACATCACCCCTTCTGAGATAGTCTCCCACCTCCCCAGCAAGAACCCAGATGCGCCTGTTATGCTTGATCGTATGTTGCGCCTCCTAGCCAGCTACAAGGTGCTCACGAGCAGTTTGCGCACCCTCGACGATGGCCGGGTCGAAAGACTATACGGTCTCGCACCCGTCTGTAAATTCTTGGTTAAGAATGAAGATGGAGTGTCCATGGCTCCTTTGGTACTCATGAATCAAGACAAGGTCCTCATGGAGAGCTGGTACCATTTGAAAGACTCGGTTCTTGAAGGTGGGATTCCATTTAACAAGGCCTATGGAATGACCGCATTCGAGTACCATGGCACGGATCCTAGATTCAACAAGGTTTTCAATAGGGGAATGTCGGATCACTCCACCATAACCATGAAGAAAATCCTTCAGATATACAAGGGGTTCGAGGGCTTGAAATCGATAGTCGATGTCGGTGGTGGAACTGGAGCCATAGTTAGCATGATCGTTTCTAAGTACCCTACCATCAAGGGCATTAACTTTGATTTGCCTCATGTGATTGAAGACGCACCATCTTATCCTGGTGTTGAGCATGTTGGAGGAGACATGTTTGTGAGTGTTCCAAAAGCAGATGCTGTTTTCATGAAGTGGATTCTTCACGATTGGAGCGATGAACACAGCTTGAAATTTTTGAAGAATTGCTATGAAGCGCTGCCAGACAATGGAAAGGTGATCATCACGGAGTGTATTCTTCCAGTATTTCCGGAGACTAATCTTGCGGCTAACGGCGTCTTTCATATTGACAATATCATGTTGGCTCATAACCCTGGAGGCAAAGAGAGGACCGAGAAAGAGTTCGAGGCCTTGGCCAAGGGATCTGGGTTTACTGGTTTTCGAGTTCTGTGTTGTGCTTTTAACAGTTGGGTCATGGAATTCTGTAAATAG 1089 0.4757 MGSTQNQIKNTAEEEEEACMFAMQLASASVLPMVLKAAIELDLLEIIAKAGPGAHITPSEIVSHLPSKNPDAPVMLDRMLRLLASYKVLTSSLRTLDDGRVERLYGLAPVCKFLVKNEDGVSMAPLVLMNQDKVLMESWYHLKDSVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILQIYKGFEGLKSIVDVGGGTGAIVSMIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWILHDWSDEHSLKFLKNCYEALPDNGKVIITECILPVFPETNLAANGVFHIDNIMLAHNPGGKERTEKEFEALAKGSGFTGFRVLCCAFNSWVMEFCK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00076 362 Pfam O-methyltransferase domain 139 343 IPR001077 GO:0008171
Eupl08g00076 362 Gene3D Vaccinia Virus protein VP39 115 362 IPR029063 -
Eupl08g00076 362 CDD AdoMet_MTases 203 295 - -
Eupl08g00076 362 FunFam Caffeic acid 3-O-methyltransferase 2 114 - -
Eupl08g00076 362 SUPERFAMILY "Winged helix" DNA-binding domain 13 118 IPR036390 -
Eupl08g00076 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 362 IPR016461 GO:0008168
Eupl08g00076 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 360 IPR029063 -
Eupl08g00076 362 PANTHER O-METHYLTRANSFERASE 22 346 IPR016461 GO:0008168
Eupl08g00076 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Eupl08g00076 362 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Eupl08g00076 362 Gene3D - 2 114 IPR036388 -
Eupl08g00076 362 FunFam Caffeic acid O-methyltransferase 115 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00076 Eupl-Chr8 1757708 1761530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00076 1 362 Monolignol Biosynthesis Gene Families AT5G54160 72.452 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00076 K13066 - nnu:104585771 622.854