Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00073 ATGGGCACATACACTTCCGGAGAAGACTTGATTATAAAGACAAGGAAACCGTACACCATCACAAAGCAACGGGAGAGGTGGACAGAAGAGGAGCATAACAGGTTCCTAGAAGCTTTGAAACTGTATGGGCGAGCTTGGCAGCGAATAGAAGAGCATATTGGGACCAAGACAGCCGTGCAGATCAGAAGTCATGCACAGAAGTTTTTCTCAAAGCTGGAAAAGGAGGCTCTTATTAAAGGCATACCGCTAGGACAAACACTTGACATAGACATCCCTCCTCCACGCCCTAAAAGGAAACCAAGCAATCCATATCCTCGAAAAACCAGTTTAGGTGCTCCCACCTCGTCGTCAGTGGGAGCTAAGGATGGGAAACTATTAACATCAGCTTCAACTCTGTACCGTGCTAAACAAATACCATATCTGGAGAATGACCCACCTCCTGAGAAACCTGCTGGAACTGAAAAATTGACAAGAGCAGAAGAAACTTTGGATGAGGACAACTGCTTGGAAGTCCCTACCCTTTACCAAGAGGCTCCATGTGCTTCAATCTCTTCAGCAAGCAAGAGCTCCACCCCAACATCTGTGGTACTCACAAACTCTTGCTCTTTCAGGGAGTTTGTGCCCTCGTTAAAAGAAATAAGTGACCATGGTGCAATGGATGAATCATATCTGACTGTGGAACCCAAAGGGAATCAGAAGTTGGACAGATCTGATGCCAACTATACAGACCTGGAGAATGGAATGAGTGAAGCACCGAACATGGAAAACGGCTGCCACAATTCACATGAGAAACTGGTTCATGGAGAGAGAGCAGATGAACTAAAGCAACCAGAAAAACTTGGTCTATTGTCAACAGATGAGATACAAGCTAATCAGAACTACCCAAGGCATGTCCCTGTGCATATTGTGGATGGGAGCTCAGGAACATGCACGCAAACTCAGTCTCCTGATATGATGTACCCATCATCCATCATTCAACAAATGGGAGGAGCTCATGAAAATCCAAACTTGCTCACCAATCCAACGGCCTCTACAACTACTGAACATCACAGCAACATGTCAAGGTCTTCCATTCATCAATCATTGCCAAATTTTCCTCCTCCCTTTACTCCACTTCACCATAACCAAGACACTTACCGATCATTTCTCAACATCTCCCCTACTTTTTCTAGTTTTGTTCTATCTACTCTGCTACAGAACCCGGCAGCCCATGTGGCGGCAAACCTCGCAACTTCACTCTGGCCCTGGACAAATCTGGAAACTTCTGTAGGTTCTCCTGTAGGCACCCTTGGAGGATTTCCATTAGGACACATAAGCCCATCTCCAAATATGACAGCAATTGCTGCCGCTACTGTAACTGCTGCATCAGCATGGTGGGCAGCCCATGGATTATTGCCTTTGTGCCTTCCTCATCAAAATGGATTTACCTGCGCTCCTGCACCCACAATTGCAACTCCAACAGATGCTGGCCAAGTTCCAATGGTCAACAAAGAAAGAAAAGACAGCACCCCACAAGATCCTCCATGGAAAGGTCAGCTGGTTCTAGAATCCTCTGAGGCTCCAAAACCACAATGTTCAGTTTCTAAACCACCACCTCTGTCATCATCGGACACCGAGGAAAGTGGAGCTGCAAGGTCAGACAATGCTGAACTGAAAGCAGTAGGTCACGAGCAGAAGCCTGCACCAGTCACCGATCTCCATGACTCCAACAAAGCGAAGACCACAAAACCGGTGGATCGTTCCTCGTGTGGCTCCAACACAACCTCCAGCAGTGAAGTAGAGACAAATGCATTAGAGAAGCACGAGAAAGGAAAAGAAGAGTCAAAGGAAGCTGATGCTAGCAATCTGAGTGGTGAGCCTAACAATCGTCGCAGTAGAAGCACTAGCAACATGAACGAGGCTTGGAAGGAGGTCTCAGAAGAGGGACGACTGGCCTTCCAAGCACTTTTTAACAGAGAAGTTCTACCGCAGAGCTTTCCGACATCACATGATCTGAGGAACAAGGGACAGCATAAGAACAGTATCGAAGAAGTGAAGCAGAAGTCAACTGAGAAAGATAAAGATACTTTACAGTTAGACCTCAACAATAAGACATGGGAAAACTGTCCCAATCATCCAGGCTTGGAGAAGAGTGAGTTGTTGAGTAGTGAAAATGCAGTGAAGGGACTGCTGTTTATGGGACTCGGACATGGAAAGCTGAAGACTCATCGAACGGGATTTAAACCTTACAAAAGGTGTTCAATGGAGGCCAACGAGAGCAGGGTGACGAATGGCAGCATCCATGGTGAAGAGAAAGGTCTTAAGAGAATACGTTTAGAAGGAGAAGCTTCAACGTGA 2337 0.4638 MGTYTSGEDLIIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALIKGIPLGQTLDIDIPPPRPKRKPSNPYPRKTSLGAPTSSSVGAKDGKLLTSASTLYRAKQIPYLENDPPPEKPAGTEKLTRAEETLDEDNCLEVPTLYQEAPCASISSASKSSTPTSVVLTNSCSFREFVPSLKEISDHGAMDESYLTVEPKGNQKLDRSDANYTDLENGMSEAPNMENGCHNSHEKLVHGERADELKQPEKLGLLSTDEIQANQNYPRHVPVHIVDGSSGTCTQTQSPDMMYPSSIIQQMGGAHENPNLLTNPTASTTTEHHSNMSRSSIHQSLPNFPPPFTPLHHNQDTYRSFLNISPTFSSFVLSTLLQNPAAHVAANLATSLWPWTNLETSVGSPVGTLGGFPLGHISPSPNMTAIAAATVTAASAWWAAHGLLPLCLPHQNGFTCAPAPTIATPTDAGQVPMVNKERKDSTPQDPPWKGQLVLESSEAPKPQCSVSKPPPLSSSDTEESGAARSDNAELKAVGHEQKPAPVTDLHDSNKAKTTKPVDRSSCGSNTTSSSEVETNALEKHEKGKEESKEADASNLSGEPNNRRSRSTSNMNEAWKEVSEEGRLAFQALFNREVLPQSFPTSHDLRNKGQHKNSIEEVKQKSTEKDKDTLQLDLNNKTWENCPNHPGLEKSELLSSENAVKGLLFMGLGHGKLKTHRTGFKPYKRCSMEANESRVTNGSIHGEEKGLKRIRLEGEAST* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00073 778 MobiDBLite consensus disorder prediction 595 613 - -
Eupl08g00073 778 SMART sant 23 71 IPR001005 -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 659 687 - -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 754 778 - -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 85 121 - -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 330 370 - -
Eupl08g00073 778 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 516 636 - -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 107 121 - -
Eupl08g00073 778 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 561 575 - -
Eupl08g00073 778 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 758 778 - -
Eupl08g00073 778 PANTHER SWI/SNF COMPLEX-RELATED 8 650 - -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 330 363 - -
Eupl08g00073 778 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 519 542 - -
Eupl08g00073 778 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Eupl08g00073 778 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Eupl08g00073 778 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Eupl08g00073 778 MobiDBLite consensus disorder prediction 614 635 - -
Eupl08g00073 778 CDD SANT 26 69 IPR001005 -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 576 594 - -
Eupl08g00073 778 MobiDBLite consensus disorder prediction 665 687 - -
Eupl08g00073 778 Gene3D - 26 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00073 Eupl-Chr8 1697936 1709693 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl08g00073 Myb_DNA-binding 2.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00073 K12133 - vvi:100250535 888.641