Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00072 ATGGATCTCGAGGAGATCAACAATCGGCGCCGCTTGATCGGCGATTATATACTCGGCCCGAAAATCGGGTCGGGTTCGTTCGCTGTCGTCTGGCTGTCCAGACATCGGTCCCTGGGTCTGGATGTGGCCATCAAGGAGATCGATAAGAAGCGACTCAACCACAAGTTGAGTGACAATCTGCACAAGGAAATTACAATTCTCAGAAACATCAGACACCCAAACATTATCCGATTCTATGAAGCTATCCAGACTGTAGAAAAAATCTACCTTGTTTTGGAGTATTGTAATGGTGGTGATCTTGCTGCATACCTTCATAATCACGGAAGAGTTTCAGAGGCCGTTGCGAGGCATTTTATGAGGCAATTGGCTTCAGGATTACACGTTCTCCATGAAAACAATCTCATACATAGAGATTTGAAACCTCAGAACCTTCTTTTGTCAACTAATGATGCCACTGCTGTGTTGAAGATCGGAGATTTTGGTTTTGCAAGGTATCTGACACCCCAGGGGTTGGCTGATACATTATGCGGTTCACCGTTATACATGGCTCCTGAGATTATTCGGAACCAAAAATATGATGCAAAGGCAGACTTGTGGAGTGTTGGAGCAATTCTTTTCCAGCTGGTGGCAGGGAAGCCACCATTTGATGGCGATAGTCAATTCCAGGTTTTAATAAGCATATATGTATTGCAAATTCTAAATTTGGTTTTTGTACTTATTTTGATCCATTGTTGCACACAGCTTTTCCAGAACATTTTGACATGTAATGAGCTTCAATTCCCACCTGGTGTTTTAGAAGATTTGCATCCTGATTGTGTAGATCTTTGTAGAAGTCTATTACGCCTAAACCCAGTTGAGCGGCTAACATTTGTGGAGTTCTTCAATCACAGGTTCATGGAAAAGCCAAGGGCTACGGAAAGTGCTTGTGAATGTATGCTAAATACCACAAGTGATAGCCTAAGGAAGTCTGTGGGTGATGATCCATCGAATTCATCAGATCCGGTGAGCATGAAGACTGGAAGTATGGACCAACGTATTTTTAGTACAAGTGCCTTAAGAGTTACGGATTCTCTGGAGTCTATTGAACAAGAATATGTTCTTGTTAATGCTCACGTTGCTTCAACGGGGACTCTCTGTTTTTCACTTGAGGCATCTATGCAAGATAGTTCTGCAGACAGAGTTTTTAACTGTGCACCAAAGAATACTGGCAAGTATATAGCTGTTGCAATGCATACTGGGGAGGTGACTGGTAATTCTGTTTGTGGTAGGAGCCATGAATCTGCTCCATTAGCAGTATCACATGCATCAGCTGAACTAGGGGATGTCCAAGGACCATCTCCGTTGCAACGTGCAACTAGGCTTCAGTTATTACATCAGTATGTTCATGCTCTTTCGGAACTAGCACTGGAAAAGGTTAGTTTATTGTATGCTAAGTTTCGACTTCATCATATATCGGTCTTGCTTGATGTTGTTTATAGTTGTATTCCAATGTCAGGATATCGTATTTCTAGCAGTATGCTTCACCTTTTATGA 1533 0.4234 MDLEEINNRRRLIGDYILGPKIGSGSFAVVWLSRHRSLGLDVAIKEIDKKRLNHKLSDNLHKEITILRNIRHPNIIRFYEAIQTVEKIYLVLEYCNGGDLAAYLHNHGRVSEAVARHFMRQLASGLHVLHENNLIHRDLKPQNLLLSTNDATAVLKIGDFGFARYLTPQGLADTLCGSPLYMAPEIIRNQKYDAKADLWSVGAILFQLVAGKPPFDGDSQFQVLISIYVLQILNLVFVLILIHCCTQLFQNILTCNELQFPPGVLEDLHPDCVDLCRSLLRLNPVERLTFVEFFNHRFMEKPRATESACECMLNTTSDSLRKSVGDDPSNSSDPVSMKTGSMDQRIFSTSALRVTDSLESIEQEYVLVNAHVASTGTLCFSLEASMQDSSADRVFNCAPKNTGKYIAVAMHTGEVTGNSVCGRSHESAPLAVSHASAELGDVQGPSPLQRATRLQLLHQYVHALSELALEKVSLLYAKFRLHHISVLLDVVYSCIPMSGYRISSSMLHLL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00072 510 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Eupl08g00072 510 Gene3D Transferase(Phosphotransferase) domain 1 6 373 - -
Eupl08g00072 510 FunFam Aurora kinase A 8 98 - -
Eupl08g00072 510 ProSiteProfiles Protein kinase domain profile. 16 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00072 510 CDD STKc_ATG1_ULK_like 22 298 - -
Eupl08g00072 510 FunFam Maternal embryonic leucine zipper kinase 6 234 - -
Eupl08g00072 510 Pfam Protein kinase domain 19 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00072 510 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 7 471 IPR045269 GO:0004674|GO:0006914
Eupl08g00072 510 SMART serkin_6 16 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00072 510 MobiDBLite consensus disorder prediction 320 339 - -
Eupl08g00072 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Eupl08g00072 510 SUPERFAMILY Protein kinase-like (PK-like) 7 305 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00072 Eupl-Chr8 1686996 1695870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00072 7 292 CBL-interacting serine-threonine protein kinases AT2G30360 36.301 6.66e-53 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Eupl08g00072 Pkinase 6.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00072 - K08269 egu:105043253 516.538