Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00055 ATGCCAATATCGTCTTCGAAATCTGCAAGAGAGAAGGTAGTGGAGTCTTTGAAATCTCTGCCGACGGGAATCACATTTAGTCTTTCGGAGGAACAGCGCGTGAAATACTTACGGTTGAAGATCGAAGGAAAGGAATCGGAAGTGGATGTGATTCCAGAAGTCGATCTTTGTAAGTGGGAGCCATGGGAATTGCCAGACCAATTGAAGTTTCGGTCGGATGATTGGGAGTGGTTCTGCTTTTGCGGCGTTGATCGGAAGCATCCAAATAGTAGTCGTTCTAACAGGTCGACTAAAGCCGGGTTCTGGAAACCCACCGGACCGGATCGACAGGTCAAGTCTACCTCGTCTGGCATGAACTTAAATGCTACGAAGAAGACACTAGTGTTCTACAAAGGGCGTGCTCCCAACGGCGAGAAGACCAACTGGGTAATTCACGAGTATCGCATGAAGGGGAAGCAGGCTGACTTTGTTCTCTGTCGCTTATTCAAGAAGCCCGATAAGAACACTAAGAATTCCAACTCCGATGAAATGGAACCAATTGGCTCTTCTCTTACTGCAACCATATCTACTCCTGAAGCTACCCCATCAAGCCAAGCATTGCGACCAACTACAGAGTCAGATATGCAAGTCGTAGAGCAACAAGAGATCCGCAGCACTAGTTATGTGGCTTCTGATGTGGAAGATCGAGAAGCAAGACTTAATGAGGTGGGTCAACTGTTGGAAGACGATTGGTCGAAGTACTTGGATGAGCCAACATTTGATCCAATGGATTTAAAGGCTTTCTTCCCGGATTCCCCTGTTGCCAATGACTTCGGCCATGGCCATAACAATATGCCAGTTCAGGATGGCACTGATGATGATTCCGTCAATTTGACACAATTTTTAGATTCAGTTCTCATAAGCGACGATGAGGACTGTGTAGATTCAACTAGTCAGATGAACTCAGCTGCTGAGAGCGAGCCATTTGGTCACATTGGTATGACATCATGCGGTGGATCAAGCAGTGAGACAGAAACTGAAATGTTTCAAGCACAGGGTTATTCTGAGCTGAATGCTTCCGGGTGGTCTAATGAGCAAATGGCTCTCGGATCTTCCAGAACTGAAGCCTCCCATGTTGGACTGAATGCTTACTCTGCTAACACTGTTGATGGAACAACCAGTGAGAATAATCCTGTCAACAACAGTGGTGGTCTTGTTGGGACTGGAATCAATATAAGGACCCGCCAACCACAAGATCCATCAAGTTCCCAGAACTTAGAAACCCAAGGTACTGCCCCAAGAAGGATCCACTTGCAAACGAAACTAACCATCAGAGGAGGTTTCATCAAGGGGAGAGAATGGAGCTCCATTAATGCAGAAGCCCACGACGAGAAACAATCAATTACCCAGGCTGCTGGAGAAGCTATGGAACGTATTACCACCACTGATAACCCACAAAAGGAAACCTCCATCCTCGATTCTGACATTAATAAGGAAAATCCTGTCAACAACAGTGGTGGTCTTGTTGGGACTGGAATCAATATAAGGACCCGCCACCCACAAGATCCATCTAGTACCCAGAACTTAGAAAGCCAAGGTACTGCCCCAAGAAGGATCCACTTGCAAAAGAGACTAATCATTAGTGGAGTTTCCTTCAGGGGGAGAGAATGGAGCTCCATTAATGAAGAAGCCCACGAAGAGAAACCATCAATTACCCAGGGTGCTGGAGAAGCTATAGAACAAACTATCACCACTGATAAGCGACAGAAGGAAATCTCCTCTGAAGAACCCCCCGATACAAAGCTGAGGTTGAGATCAAGGTCAAGACGAGTTGGTTCATCCCGGTTAGCAGAGGCACCTCCCGTGCACTCCTCAAGTTTATCATCTGTTTATAGAGGAGAGATGGCAGTGTCGTCTAAGTCTTTGAAATCTATGCCGTTGGGATTCAGATTTCATCCTACGGACGAAGAGCTCGTGGATCACTACTTACGGTTGAAGATCAAAGGAAAGGAATCGAAAGTGGAGGTGATTCGAGAAGTTGATGTTTGTAAGTTGGAGCCATGGGAATTGCCAGACCTATCGGTGATTAAGTCGGATGATCAGGAGTGGTTCTTCTTTTGTCCACGTGATCCAAAGTATCGAAATGGTCATCGTACTAACAGGTCGACGAAAGCCGGTTTCTGGAAACCCACCGGACCGGATCGAAATGTCAAGTCTGGCAAGAACTTGCTTGGTACGAAGAAGACACTGGTTTTCTACAAAGGACGTTCTTCTAAGGGTGAGAGGACCAACTGGTTAATGCACGAGTATCGCGCCAATGAGAAGGACCTCGGCGGCACCAAATCCAAGCAGCGTGGCTTTGTTCTCTGTCGCTTATTCAAGAAGCCCGATGAAAACACAGAGAATTTGAACTGTGAGGAAATGGGACCAACTGTCTCCTCTCCTGAAGCTACGCCATCAAATGTTCTAGCAAATACAGGGTCAGATATGCGAGTTGGAGAGCAACTGGGTGATAAGTCAGACAATAGCAATGTGACTTGCAATGTGGAAGATCGAGAAGCAGTAGCAGATCAACATCCACAACCGGAAGAGGAAGAACATTTCACGAGCATCCCCGTTGAGCCAATATCCCATCCTAACACTGGGCTAGGATCTTCTTCCATGGATTCCCCCGTTGCCAGTGACTTTGGCTATAACGGGATGTCGTTTCGGGATGGCACTGATGTGCCGGACATCTCTTTCTCAGATGCACTTCTCAATGGCCAGGATGAGAGCGATTTTCACCACCTATACGCTACTCCTACACCCAGGGGGGAGCGTATTGAAGCTTCTGGGATGCCACCTTCCCCCCGGTTTATGACCTTTCAGATGGGCAGCGTCAATGAAGCTTCTGGGCAAGCTTCCCACCGGTTTGACGAGTTCTATATGACCCTTCAAGGACGGCGCATCGGTGGCATGCCAAGGGTATTTCCGGTCAGTGATCTACACAGCTCATTACCAGAGGCACCTCCTGTGCGCTCCACGAGCATCTCATCTCGTCGGATAGTCTGCGGAGCAGTATTTATGATCCTATTCATCCTGTTCATTCTCTTTATCGAGCACCATGAAGAATTTTTTAAATATTTTTTGATAGGTTTTTGGGCACATAGATGGATAGAGAATATGACATAA 3150 0.4705 MPISSSKSAREKVVESLKSLPTGITFSLSEEQRVKYLRLKIEGKESEVDVIPEVDLCKWEPWELPDQLKFRSDDWEWFCFCGVDRKHPNSSRSNRSTKAGFWKPTGPDRQVKSTSSGMNLNATKKTLVFYKGRAPNGEKTNWVIHEYRMKGKQADFVLCRLFKKPDKNTKNSNSDEMEPIGSSLTATISTPEATPSSQALRPTTESDMQVVEQQEIRSTSYVASDVEDREARLNEVGQLLEDDWSKYLDEPTFDPMDLKAFFPDSPVANDFGHGHNNMPVQDGTDDDSVNLTQFLDSVLISDDEDCVDSTSQMNSAAESEPFGHIGMTSCGGSSSETETEMFQAQGYSELNASGWSNEQMALGSSRTEASHVGLNAYSANTVDGTTSENNPVNNSGGLVGTGINIRTRQPQDPSSSQNLETQGTAPRRIHLQTKLTIRGGFIKGREWSSINAEAHDEKQSITQAAGEAMERITTTDNPQKETSILDSDINKENPVNNSGGLVGTGINIRTRHPQDPSSTQNLESQGTAPRRIHLQKRLIISGVSFRGREWSSINEEAHEEKPSITQGAGEAIEQTITTDKRQKEISSEEPPDTKLRLRSRSRRVGSSRLAEAPPVHSSSLSSVYRGEMAVSSKSLKSMPLGFRFHPTDEELVDHYLRLKIKGKESKVEVIREVDVCKLEPWELPDLSVIKSDDQEWFFFCPRDPKYRNGHRTNRSTKAGFWKPTGPDRNVKSGKNLLGTKKTLVFYKGRSSKGERTNWLMHEYRANEKDLGGTKSKQRGFVLCRLFKKPDENTENLNCEEMGPTVSSPEATPSNVLANTGSDMRVGEQLGDKSDNSNVTCNVEDREAVADQHPQPEEEEHFTSIPVEPISHPNTGLGSSSMDSPVASDFGYNGMSFRDGTDVPDISFSDALLNGQDESDFHHLYATPTPRGERIEASGMPPSPRFMTFQMGSVNEASGQASHRFDEFYMTLQGRRIGGMPRVFPVSDLHSSLPEAPPVRSTSISSRRIVCGAVFMILFILFILFIEHHEEFFKYFLIGFWAHRWIENMT* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00055 1049 SUPERFAMILY NAC domain 633 788 IPR036093 GO:0003677|GO:0006355
Eupl08g00055 1049 FunFam Nac domain-containing protein 86 647 791 - -
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 867 884 - -
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 186 205 - -
Eupl08g00055 1049 SUPERFAMILY NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 88 116 - -
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 382 427 - -
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 316 335 - -
Eupl08g00055 1049 Pfam No apical meristem (NAM) protein 21 149 IPR003441 GO:0003677|GO:0006355
Eupl08g00055 1049 Pfam No apical meristem (NAM) protein 639 764 IPR003441 GO:0003677|GO:0006355
Eupl08g00055 1049 Gene3D NAC domain 647 793 IPR036093 GO:0003677|GO:0006355
Eupl08g00055 1049 Gene3D NAC domain 30 169 IPR036093 GO:0003677|GO:0006355
Eupl08g00055 1049 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 637 836 - -
Eupl08g00055 1049 ProSiteProfiles NAC domain profile. 638 788 IPR003441 GO:0003677|GO:0006355
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 848 884 - -
Eupl08g00055 1049 ProSiteProfiles NAC domain profile. 20 164 IPR003441 GO:0003677|GO:0006355
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 848 864 - -
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 576 599 - -
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 509 528 - -
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 576 614 - -
Eupl08g00055 1049 MobiDBLite consensus disorder prediction 509 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00055 Eupl-Chr8 1433265 1452950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00055 634 911 NAC Transcription Factor Family AT4G35580 51.056 4.20e-82 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl08g00055 NAM 9.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00055 - - ming:122069695 330.487