Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00050 ATGGATGCTGCCGGGGAGCTCAACAAGAAGAGAAAGAAAAACTCCATTACTAGACTTAGCTTTTCGGCAAGTTTGCCGAAGGATGTTCAGGGGGTTTATGCAGACAGCATATGTGCAGTGAAGTTCTCACTCGACCCGTTAGCGGATTTGCAGGAATCCATACGAGAGATGATCAGAGACGTCGGCGTTCGTGATTGGGAGGAGATGGAGGAGTTGGTTTACTGTTACTTGGTTCTTAATTCATCAGATATCCATGGATTCATTGGAGATGCTTTCCTCAGCTTATGTTGTTCTCATAATGATTTGGGTTGA 312 0.4487 MDAAGELNKKRKKNSITRLSFSASLPKDVQGVYADSICAVKFSLDPLADLQESIREMIRDVGVRDWEEMEELVYCYLVLNSSDIHGFIGDAFLSLCCSHNDLG* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00050 103 Pfam Transcriptional repressor, ovate 43 98 IPR006458 -
Eupl08g00050 103 ProSiteProfiles OVATE domain profile. 39 98 IPR006458 -
Eupl08g00050 103 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 22 97 IPR038933 GO:0045892
Eupl08g00050 103 NCBIfam uncharacterized plant-specific domain TIGR01568 39 97 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00050 Eupl-Chr8 1384543 1384854 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Eupl08g00050 Ovate 3.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00050 - - ming:122077991 132.88