Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00043 ATGGGAACCTCAAAGACCTGTGCTGCTTCCATGGCCATGTTAGTGGTGCAGTTCGGTTACGCTGGTTCGAACATTCTCATCAAAATTGCACTGGAGAAGGGAATGAATCAACTAGTCTTTGTAGTGTATCGACACCTAATTGGCATGCTCGTGTTTGGTGCTTTGGCATATGCGCTCGAGAGGAAACAACGCCCTTCGCTTTCATTTTCGACGATCATGAAGATTTTCGTGCTTTCATCACTTGGTACTACTATCCACCTTAATGTCTTCTATACTGGCCTCAAATACACTTCTCCAACAGTTTCATCTGTCTTAAGTAATATCATTCCCGGTTTCACGTTCCTACTCGCAGTTTTATTCCGGATGGAGAAAGTGAGGCTTTGTAGTGTTAATGGCCAAGCAAAGGTTTTGGGTACTTTGATTTGTATCGGCGGTGCACTCGTATTTACCTTCTGGAAAGGAGGGTACCTATTCAAAGGTTTCATTGAAAAACCATTGATCAATATCCATAAAACAGATAATTCTGTTGTTGCGTTGAGACGCCATAAAGACGATTGGATCAAAGGCTCGGCTCTTATTTTACTTAGCGATGTCACTTGGAGCGCATGGCTCATTCTTCAGGCCGTGGTCTGCAAGGCCTATCCAGCTCAGTTGTCACTGAACACTTTAATTTGTTTCTTTGCATCACTGCAATCTTCGGTTCTTACACTTGTTTTTGATAGAAAACCCGCGTCGTGGAAATTGGAATGGAATGTGCAGCTCCTAACTATCGTCTACTGCGGAATTGTGAACTCTACCTTGCTTTACTACCTACAGACATGGTGTATCAGTGAGAAGGGGCCGGTTTTTACCGCCATGTTTTATCCATTACTTCTTGTAATTGTTGGGATATTCTCAGCAATTTTCTTTGCAGAGCGGCTTCACTTAGGCAGCTTGATCGGCGCATTCCTCATAATCGTTGGCCTATATTGTGTATTATGGGGCAAGAGCAAGGACAGTAATGTGGAAGGGAAGTCAGGGAGTGAAAAAGGTTCTGTTGATCATCAAAAACTTGAGATCCCCATAACTAACAATCCTGTAATCGTCCCAATTACAAGTGAAAAGAAGTGA 1110 0.4297 MGTSKTCAASMAMLVVQFGYAGSNILIKIALEKGMNQLVFVVYRHLIGMLVFGALAYALERKQRPSLSFSTIMKIFVLSSLGTTIHLNVFYTGLKYTSPTVSSVLSNIIPGFTFLLAVLFRMEKVRLCSVNGQAKVLGTLICIGGALVFTFWKGGYLFKGFIEKPLINIHKTDNSVVALRRHKDDWIKGSALILLSDVTWSAWLILQAVVCKAYPAQLSLNTLICFFASLQSSVLTLVFDRKPASWKLEWNVQLLTIVYCGIVNSTLLYYLQTWCISEKGPVFTAMFYPLLLVIVGIFSAIFFAERLHLGSLIGAFLIIVGLYCVLWGKSKDSNVEGKSGSEKGSVDHQKLEIPITNNPVIVPITSEKK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00043 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 331 - -
Eupl08g00043 369 PANTHER WAT1-RELATED PROTEIN 11 338 IPR030184 GO:0016020|GO:0022857
Eupl08g00043 369 Pfam EamA-like transporter family 12 149 IPR000620 GO:0016020
Eupl08g00043 369 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
Eupl08g00043 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00043 Eupl-Chr8 1326483 1328552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00043 12 335 Nodulin-like Gene Family AT5G07050 41.667 1.28e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00043 - - vvi:100260287 490.73