Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00041 ATGAAATTGTCGTTTAGTCTCCCTTCCAAGCCGTCGTCGAGACGGAACCAAAAACCCTCAGAGAATTTCAATCAACAAGACCCAAAAGACGATCGTGAAACGAAGCATGAGTACGTGACCGAGTTCGACCCTTCCAAAACCCTAACCGACAAACGACCGAAGTTCGTGATCCCGCCGAAGGAAAACACATGGAGAGCCGAGAAGAAGATGAAAAACCTCGATCTCCCCATTCGCTCCTCCACCGATGATCCTGACCTCCGTTTCGAACTCGAGGCTCCCTCCACCACCAACACGGATTCCGGCATGTCCTTTGGCTTGAATGTGAGAACAAAAGAAGATGGCGGCATTACTGATGATCTTCCAGCCCAATCCAGGCCTCCTGTTTCGATCGATAATTTGATGTTGCAGAAATTCAAAGAGGACATGAAGAATTTGCCCGACGACCGAGGATTTGATGAGTTCTTAGATGTCCCTGTTGAGGGTTTTGGTGCAGCTTTACTTGCTGGGTACGGATGGTCTGAAGGAAAAGGTATTGGAAGGAGTGCGAAGGAAGACGTAAAAGTTGTTCAGTATGTGAGGAGAGCTGGAAGGGAAGGGTTAGGTTTTGAGCCTGAAACGCATGATACGAAAAAGAAAGGGCAAAATTCACGTCCCCTACTTGTCGCCCCGAAAGGGCCCGATGGGCGGACTCGACATATTGTAGGGATTGATGAGAAGCTTGTCCCAAGGGATCTGAAAGGGATTCATGTGGGTAAGATTGTGAGGATTGTGGGTGGCAAGCATGTGGGTTTGAAGGGGAAGGTTGTGGAGAAATTGAATGATGAATCTTTGGTTGTTTTGAAGCTGTCAAGGAGTGGAGAGGAAGTTACAGTTAGGGTAGATGAAGTCGCTGAATTGGGTTCAGTGGAAGATGATATCTGCTTGAGGAAGTTGCAGGAGTTGAAGATTCGGGGGTCTAAGGATGATAGAAAACATGATGAGAAAAAGGATTCTTCAAGTCATGGCGATAGGGAAAGGAGGGACGGAAGCAGGGATGACAGAAGGAAGGATAAAAAAAGGAACAGAGAAGAAGTAGGCAGAGGTGATGAAACAAAACGTGATAATGGAGCTGCATATCGATCTAGTAGCAGAGATAGTGGCCGAAGTGAAGAAGGGAGGAGGAAACCAGTTTCTTGGCTGATGAGTCATATTCGAGTTAGAATAATTAGCAAAGACTTCAGAGGAGGAAAGTTGTACTTGAAAAAAGGCGAGGTTTTGGACGTTGTAGGACCGACAACATGCGACATATCTATGGATGAGGGCAGGGAGCTCGTCCAAGGTGTGGATCAAGATATTCTGGAGACGGCTCTCCCAAAGCGTGAGGGCCCAGTTCTTGTGCTGTATGGGAAGCACAAGGGTGCCTTTGGAAACCTTGTGGAGAGAGATATGGAGAAAGAAACAGGTGTTGTCCGGGACGCAGATAGCCATGCATTGCTCAAAGTGCGCCTGGAACAAATTGCAGAGTACGTAGGAGATTTGAACTATATCGGATATTAA 1536 0.4714 MKLSFSLPSKPSSRRNQKPSENFNQQDPKDDRETKHEYVTEFDPSKTLTDKRPKFVIPPKENTWRAEKKMKNLDLPIRSSTDDPDLRFELEAPSTTNTDSGMSFGLNVRTKEDGGITDDLPAQSRPPVSIDNLMLQKFKEDMKNLPDDRGFDEFLDVPVEGFGAALLAGYGWSEGKGIGRSAKEDVKVVQYVRRAGREGLGFEPETHDTKKKGQNSRPLLVAPKGPDGRTRHIVGIDEKLVPRDLKGIHVGKIVRIVGGKHVGLKGKVVEKLNDESLVVLKLSRSGEEVTVRVDEVAELGSVEDDICLRKLQELKIRGSKDDRKHDEKKDSSSHGDRERRDGSRDDRRKDKKRNREEVGRGDETKRDNGAAYRSSSRDSGRSEEGRRKPVSWLMSHIRVRIISKDFRGGKLYLKKGEVLDVVGPTTCDISMDEGRELVQGVDQDILETALPKREGPVLVLYGKHKGAFGNLVERDMEKETGVVRDADSHALLKVRLEQIAEYVGDLNYIGY* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00041 511 ProSiteProfiles G-patch domain profile. 159 205 IPR000467 GO:0003676
Eupl08g00041 511 PANTHER G PATCH AND KOW-CONTAINING 1 505 IPR045166 GO:0000398
Eupl08g00041 511 SMART G-patch_5 157 203 IPR000467 GO:0003676
Eupl08g00041 511 MobiDBLite consensus disorder prediction 1 127 - -
Eupl08g00041 511 Pfam G-patch domain 146 205 IPR026822 -
Eupl08g00041 511 SMART kow_9 450 477 IPR005824 -
Eupl08g00041 511 SMART kow_9 247 274 IPR005824 -
Eupl08g00041 511 MobiDBLite consensus disorder prediction 91 105 - -
Eupl08g00041 511 MobiDBLite consensus disorder prediction 24 89 - -
Eupl08g00041 511 MobiDBLite consensus disorder prediction 201 224 - -
Eupl08g00041 511 MobiDBLite consensus disorder prediction 1 23 - -
Eupl08g00041 511 Gene3D - 396 450 - -
Eupl08g00041 511 MobiDBLite consensus disorder prediction 318 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00041 Eupl-Chr8 1304770 1310202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00041 373 484 C2H2 Transcription Factor Family AT1G55460 30.769 7.79e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00041 K13101 - nnu:104596842 582.022