Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00040 ATGATTGGCAGAAGGTTAAAAATGAGTACACCAAGTGCGAATGACGATTGCCTAGGATGGGCAGCAAGAGATCCATCCGGAGTTCTCTCACCCTACAACTTCAGCCGCAGGGTACTCGGATGTGATGACGTTTCACTGCAAATAACACACTGTGGAGTTTGTTATGCGGATGTCATCTGGACAAGGAATGGCCACGGAGACTCGAAATATCCGTTGGTGCCTGGACATGAGATTGCTGGAATAGTGAAAGAGGTTGGTTCCAACGTTCACCGCTTCAAAATAGGTGATCATGTTGGAGTGGGAACATATGTGAACTCATGTAGAGATTGTGATTATTGTAATGATGAGCTCGAAGTTCATTGCTCAAAGGGCCAAACCTTCACCTTTAATGCTGTTGATGTGGATGGCACAATCACAAAGGGAGGATATTCCAGTTATATCGTAGTTCATGAAAGGTACTGCTACAGAATACCTGATAACTACCCATTAGCTTCAGCAGCACCCTTGCTGTGTGCTGGAATTACAGTTTATACTCCCATGATTCGCCATAAGATGAACCAACCTGGTAAATCTCTTGGTGTGATTGGGCTAGGTGGCCTCGGTCATATGGCTGTGAAGTTTGGAAAGGCTTTTGGATTACATGTAACAGTTTTCAGCACGAGTATATCCAAGAAAGAAGCAGCCCTGAATCTCCTTGGAGCTGACAAATTTGTGATCTCATCTGACAAACAACAAATGGAGGCCTCGGCAAAATCTCTCGACTTCATAATAGATACCGCATCCGGGGATCACCCATTTGATCCATACATGGCACTCTTGAAGACTGCTGGCGTTTTGGTCTTAGTGGGCTTTCCGAGTGAGATCAAATTCCATCCTGCAAGTCTTAATCTGGGTTCAAAAACTGTTTCTGGAAGTCTAACAGGTGGTACGAAAGGTACGCAGGAAATGTTAGATTTCTGCGCTGCCCACAAAATATACCCTGAGATCGAAGTTATTCCAATCCAGTACATAAATGAAGCACTCGAGAGGCTAATAAACAGGGATGTGAAGTACCGTTTTGTGATTGATATTGAGAACTCCTTGAAATGA 1089 0.4408 MIGRRLKMSTPSANDDCLGWAARDPSGVLSPYNFSRRVLGCDDVSLQITHCGVCYADVIWTRNGHGDSKYPLVPGHEIAGIVKEVGSNVHRFKIGDHVGVGTYVNSCRDCDYCNDELEVHCSKGQTFTFNAVDVDGTITKGGYSSYIVVHERYCYRIPDNYPLASAAPLLCAGITVYTPMIRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLHVTVFSTSISKKEAALNLLGADKFVISSDKQQMEASAKSLDFIIDTASGDHPFDPYMALLKTAGVLVLVGFPSEIKFHPASLNLGSKTVSGSLTGGTKGTQEMLDFCAAHKIYPEIEVIPIQYINEALERLINRDVKYRFVIDIENSLK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00040 362 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 192 219 IPR029752 -
Eupl08g00040 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Eupl08g00040 362 Pfam Zinc-binding dehydrogenase 199 321 IPR013149 -
Eupl08g00040 362 Pfam Alcohol dehydrogenase GroES-like domain 42 156 IPR013154 -
Eupl08g00040 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 162 325 IPR036291 -
Eupl08g00040 362 Gene3D - 172 327 - -
Eupl08g00040 362 FunFam Putative cinnamyl alcohol dehydrogenase 6 328 357 - -
Eupl08g00040 362 FunFam Cinnamyl alcohol dehydrogenase 172 327 - -
Eupl08g00040 362 SUPERFAMILY GroES-like 23 190 IPR011032 -
Eupl08g00040 362 FunFam Uncharacterized protein 20 171 - -
Eupl08g00040 362 Gene3D - 20 357 - -
Eupl08g00040 362 PANTHER ALDEHYDE REDUCTASE 16 360 IPR047109 GO:0016616
Eupl08g00040 362 SMART PKS_ER_names_mod 27 355 IPR020843 GO:0016491
Eupl08g00040 362 CDD CAD1 19 356 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00040 Eupl-Chr8 1292018 1302103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00040 9 362 Monolignol Biosynthesis Gene Families AT1G72680 76.836 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00040 K00083 - cave:132174908 637.106