Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00039 ATGAGTACACAAAGAACGAATGAGGATTGCCTAGGATGGGCAGCAAGAGATCCATCTGGAGTTCTATCGCCTTACAAATTCAGCCGAAGGGTACTCGGATGTGATGACGTTTCCCTGAAAATAACACACTCTGGAGTTTGTAATGCTGATGTCCTCTGGCCAAGGAATAAACTCGGAGACGCGAAATATCCATTGGTGCCTGGACATGAGATTGTTGGAATTGTGAAAGAGGTTGGTTCCAATGTTCACCGCTTCAAAATCGGCGATCATGTTGGAGTAGGAACATATGTGAACTCATGTAAACATTGCGAGTATTGTAATGATGGGCTAGAAGTTCATTGCTCAAAGGGTCTAACCTACACCTATAATGGTGTTGATGCTGATGGAACAATCACAAAGGGAGGATTTTCCATACACAGGTACTGCTACAGAATACCTGAAAACTACCCATTAGCTTCCGCCGCACCCTTGTTATGTGCTGGAATTACGGTTTATACTCCCATGATACGCCATAAGATGAACCAGCCTGGTAAATCTCTTGGTGTGATTGGGCTAGGTGGCCTTGGTCATATGGCTGTGAAGTTTGGGAAGGCGTTTGGATTAAATGTAACAGTTTTCAGTACGAGTAAATCCAAGAAAGAAGAAGCTCTGAATCTCCTTGGAGCTGACAAATTTGTGATCTCGTCTGACAAACAACAAATGGAGGCCTTGGCAAAATCTCTTGACTTCATAATCGACACCGCATCCGGGGAGCACTTATTTGATCCATACATAGAGCTCTTGAAGATTGCTGGCGTTTTAGTCCTAGTCGGCTGTCCAAGTGAAGTCAAATTCCATCCTTTAAGCCTGCTTCTGGGTACCTCCCTCTTCTTATCCTCCTAG 882 0.4433 MSTQRTNEDCLGWAARDPSGVLSPYKFSRRVLGCDDVSLKITHSGVCNADVLWPRNKLGDAKYPLVPGHEIVGIVKEVGSNVHRFKIGDHVGVGTYVNSCKHCEYCNDGLEVHCSKGLTYTYNGVDADGTITKGGFSIHRYCYRIPENYPLASAAPLLCAGITVYTPMIRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVFSTSKSKKEEALNLLGADKFVISSDKQQMEALAKSLDFIIDTASGEHLFDPYIELLKIAGVLVLVGCPSEVKFHPLSLLLGTSLFLSS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00039 293 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 180 207 IPR029752 -
Eupl08g00039 293 FunFam Cinnamyl alcohol dehydrogenase 160 293 - -
Eupl08g00039 293 PANTHER ALDEHYDE REDUCTASE 7 289 IPR047109 GO:0016616
Eupl08g00039 293 CDD CAD1 12 286 IPR047109 GO:0016616
Eupl08g00039 293 Gene3D - 13 159 - -
Eupl08g00039 293 Pfam Alcohol dehydrogenase GroES-like domain 35 136 IPR013154 -
Eupl08g00039 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 286 IPR036291 -
Eupl08g00039 293 Gene3D - 160 288 - -
Eupl08g00039 293 SMART PKS_ER_names_mod 20 291 IPR020843 GO:0016491
Eupl08g00039 293 Pfam Zinc-binding dehydrogenase 187 277 IPR013149 -
Eupl08g00039 293 SUPERFAMILY GroES-like 16 178 IPR011032 -
Eupl08g00039 293 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00039 Eupl-Chr8 1286760 1288434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00039 2 293 Monolignol Biosynthesis Gene Families AT1G72680 70.034 5.05e-147 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00039 K00083 - vvi:100244482 476.092