Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00028 ATGCTCAAGCGCATGCCCGCAAATGACCGGTCCAGATCAAGGCTTCAGCTCTTCAGCAAGCTAAATGCCCAGATGCCAAGCGCCACAAATATCCATGGCGCGCGGAACCACTGTATAACCGTTTTACTGAAGGCGAACCTTTGCGGGGTTTGCGATTTCCCTCCAGAGTACATGGGGAGCCCGCTGGTGCTTCATCGTTTTGCAAATCAAATAGTAACCTTTCGCCCTTTCATCTCCCGCTACATTTTCTCTGAACACGGAGGTGTTCTTAGTCGGCCTCAGAAACTCTATTTCTCCTCTGTAACTTTAACAAACTCAGCCGTCCGAAGGTGCGATGGCCAAGTTAGGGCATCGAAATCAGATCAGCTCCGGAGCTTCTGTGCAGACGCAGTGGTCGTTGCCATGGACAAGAAGTACGGAAACAAACAGGTTATCAGCATAACTCCTCAGCTTTACGATTACATACTGGACAATGTTCGCGAACCGGAGATCCTGCGTGAGCTTCGTGAAGAGACTGCGACTATGCGAGGAAGTCAGATGCAGGTATCTCCTGATCAGGCACAACTACTTGCAATGCTTGTCCAGATTCTTGGGGCGCAACGGTGTATTGAAGTCGGTGTTTATACTGGATACTCATCCTTGGCTATTGCCTTAGTCCTACCAGAATCAGGTTGTTTGGTTGCATGCGAAAGAGATGCAAAATCTCTTGAGATTGCAAAAAAGTACTACGAGAAAGCTGGTGTTTCTCACAAGGTGGATGTCAGACATGAACTAGCAGTGGATTCTCTAAAATCACTGATTCTGAACGGGGAAGCTTGCAGCTATGATTTTGCATTTGTTGATGCTGAGAAGAGATTATACCATGAATACTTTGAGTTGCTACTACAATTGGTGAAGGTTGGGGGTGTAATTGTATTTGATAATGTCCTCTGGCATGGGAAAGTTGCTGACCCACTGGTAAATGACCCAAAGACTGTCAGCATAAGAAACTTCAATAAAAGTGTAATGGAGGATAAGCGTGTTAGCATTAGTATGGTACCTATCGGAGATGGAATGACAATATGCCGCAAAAGGTGA 1077 0.4624 MLKRMPANDRSRSRLQLFSKLNAQMPSATNIHGARNHCITVLLKANLCGVCDFPPEYMGSPLVLHRFANQIVTFRPFISRYIFSEHGGVLSRPQKLYFSSVTLTNSAVRRCDGQVRASKSDQLRSFCADAVVVAMDKKYGNKQVISITPQLYDYILDNVREPEILRELREETATMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDAKSLEIAKKYYEKAGVSHKVDVRHELAVDSLKSLILNGEACSYDFAFVDAEKRLYHEYFELLLQLVKVGGVIVFDNVLWHGKVADPLVNDPKTVSIRNFNKSVMEDKRVSISMVPIGDGMTICRKR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00028 358 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 141 358 IPR002935 GO:0008171
Eupl08g00028 358 CDD AdoMet_MTases 201 306 - -
Eupl08g00028 358 PANTHER O-METHYLTRANSFERASE-RELATED 141 357 - -
Eupl08g00028 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 358 IPR029063 -
Eupl08g00028 358 Pfam O-methyltransferase 159 357 IPR002935 GO:0008171
Eupl08g00028 358 Gene3D Vaccinia Virus protein VP39 141 358 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00028 Eupl-Chr8 1194489 1202764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00028 128 346 Monolignol Biosynthesis Gene Families AT3G62000 79.452 1.49e-128 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00028 - - ming:122057349 432.565