Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00012 ATGCAGCAAGGAGGGTCCCAATATGGTGTGTCACCGGAGATGACACCTTTCTCTGGAACTAGTACCAGTCGAACCCACATGCTTGGACTTTCCAGCTCCGACCACTTACAGCAGCAACAGCAACAGCAACAAAAATCCGGAGATGCAGCGATGGCAGTTGCTGAAGCAGCATCACCCATCAGTAGCCGACCACCTGCTGTTGCCCGTTCAACAGGTAATTTCGATGAATTAGTGCCAGTATCCTCCGGTGGGTTTCCAGATGAGGAAGCGCTAGCTGGAGAGGAATCAGAACGGGGAGTAACCGGAGGGAATAGATGGCCACGACAAGAGACCTTGGCTCTTTTGAAGATTAGGTCGGAGATGGATACGGCGTTTCGTGATGCCACCCTCAAAGGACCTCTATGGGAGGAAGTCTCCAGGAAGTTAGCCGACCTGGGCTACATCAGAAGTGCTAAGAAATGCAAGGAGAAATTCGAGAACGTCCACAAGTACTACAAGCGAACCAAGGAAGGTCGAGCTGGCCGTCAAGACGGCAAGAGCTACAGGTTTTTCACCCAGCTTGAGGCTCTTCACAGTGGTAGCGGCAGCACCACCACCATTCCCGCCCTGCCTACTACCTCCAACACCATCACTACAACCAATCCACCCACCGTCGTCGCTGTTTCAATGGGGATGGGAATGGTAGGCTCATCAGCTGGAAGAATTCAACCTCCGGTTTCAGCCACTCCGATTGCCACTACTACTACTACTACTACCCAGATCGGAGTATCTCGAATCGTTCCTCCTCCCGATCTGAGTGGTGGAATAGCCACTGGGGTATCTGGATTTGCTACTGCGGCGGGTCCCACCGTCACCGCTGGGATCAGCTTCTCCTCCAACACCTCTTCTTCCTCTTCGGACTCTGACGACGACGACTTGGAAGGAGGCCCCTCCAACACGAACAGCCGTAAGAGAAAACGGGGTTCAAGCGGAGGCAGTAGCAGTCGTAAGATGATGATTTTCTTCGAGGGGCTTATAAAACAAGTGATGGAGAAGCAGGAGGCCATGCAGCAAAGGTTCTTGGAAACCATAGAAAAGAGAGAGCAAGACAGGATGATAAGGGAAGAGGCTTGGAAGCGTCAGGAGATGGCAAGGCTCAGCCGCGAACATGAGATCATGGTTCAAGAGCGAGCCATCTCCGCTTCCCGGGATGCCGCCGTCATCAATTTCCTTCAGAAAATCACTGGCCAGACCATCCAATTACCACAGCCCTTATCGATCCCTGCCGCCCCACCACCTCAATCTACACCAACTCCACCGCCACAAGCCCCGCCACCACCACACCATCATCATCATCAACAACAACAACAACAACACCAACACCAACCCCATCAGCATCATCCATCTCAGAGCACAGAAGTCATCCGACATCAACCAGCTTCTACAGAAATAGTCATAGCCGTCCCAGAACAGCAGCACCCACCAGCGGAGATGGGGAGTGGTAGCTTCGATCCGACCTCCTCAAGGTGGCCAAAGGCCGAAGTGCACGCACTTATCAAGCTGAGGAGCGGGCTTGAATTGAGGTACCAAGAGGCGGGGCCAAAGGGCCCTCTTTGGGAAGAGATATCAGGAGGGATGCAGCGGATGGGCTATAACAGAAGCGCAAAGAGATGCAAGGAGAAATGGGAGAACATTAATAAGTACTTCAAGAAAGTGAAAGAGAGCAACAAGAAGCGCCCCGAGGATGCCAAGACCTGCCCATATTTCCACCAACTAGATGCGCTCTATCGGAAGAAGGTACTTGGCAGTAGTAGTAGCAGTGGTGGTACTGGTGGCGGTGGGAGCGGCAGCTTTGGAAACCAGACCAAGCAAGAGCCACAACAGCAGCAGTCTACGATGGTGATAGATCCAAATCCAGCAACAAATTTGCAAGCGATTACCGGTCCGCCGCCACCAGCACCAGCAGCACCACCGCAAACCAGTGAAGCAGAAAACAAGAACAACAATAAGAATGGTGGTGGAAATGCAGAGGTGCAGAGCAGTAACGAAGGTTTTCCTCCAAGCTTCTTTGAAGAAGGAAATAGTGGTGGAGGTGGTGGAGGAACGAAGAAGCCAGAAGACATTGTGAAGGTGCTGATGGAGCAACAACAGCAACAGCACCACCACCAACAACAGTCGGTGATGGACGATTATGATAAGTTGGAGGAAGCCGACAGCGATAATCTAGATCAAGAAGAAGATGAGGATGAAGATGAAGATGACATGGACGAAGACACAGAAGAAGAGAGTAAGATGGCTTATAAAATTCAGTTCCAGAGGCAGAATGTGAGCTCTTCTAATGGGGGAGGAAATGCAGCTAACTCCTTCTCGGCCATGGTTAAATAG 2364 0.5165 MQQGGSQYGVSPEMTPFSGTSTSRTHMLGLSSSDHLQQQQQQQQKSGDAAMAVAEAASPISSRPPAVARSTGNFDELVPVSSGGFPDEEALAGEESERGVTGGNRWPRQETLALLKIRSEMDTAFRDATLKGPLWEEVSRKLADLGYIRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFTQLEALHSGSGSTTTIPALPTTSNTITTTNPPTVVAVSMGMGMVGSSAGRIQPPVSATPIATTTTTTTQIGVSRIVPPPDLSGGIATGVSGFATAAGPTVTAGISFSSNTSSSSSDSDDDDLEGGPSNTNSRKRKRGSSGGSSSRKMMIFFEGLIKQVMEKQEAMQQRFLETIEKREQDRMIREEAWKRQEMARLSREHEIMVQERAISASRDAAVINFLQKITGQTIQLPQPLSIPAAPPPQSTPTPPPQAPPPPHHHHHQQQQQQHQHQPHQHHPSQSTEVIRHQPASTEIVIAVPEQQHPPAEMGSGSFDPTSSRWPKAEVHALIKLRSGLELRYQEAGPKGPLWEEISGGMQRMGYNRSAKRCKEKWENINKYFKKVKESNKKRPEDAKTCPYFHQLDALYRKKVLGSSSSSGGTGGGGSGSFGNQTKQEPQQQQSTMVIDPNPATNLQAITGPPPPAPAAPPQTSEAENKNNNKNGGGNAEVQSSNEGFPPSFFEEGNSGGGGGGTKKPEDIVKVLMEQQQQQHHHQQQSVMDDYDKLEEADSDNLDQEEDEDEDEDDMDEDTEEESKMAYKIQFQRQNVSSSNGGGNAANSFSAMVK* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00012 787 MobiDBLite consensus disorder prediction 418 441 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 761 787 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 726 753 - -
Eupl08g00012 787 CDD GT1 104 169 - -
Eupl08g00012 787 FunFam Trihelix transcription factor GT-2 106 167 - -
Eupl08g00012 787 FunFam Trihelix transcription factor GT-2 503 564 - -
Eupl08g00012 787 SMART sant 499 561 IPR001005 -
Eupl08g00012 787 SMART sant 102 164 IPR001005 -
Eupl08g00012 787 ProSiteProfiles Myb-like domain profile. 501 559 IPR001005 -
Eupl08g00012 787 Gene3D - 503 564 - -
Eupl08g00012 787 Gene3D - 106 167 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 595 636 - -
Eupl08g00012 787 ProSiteProfiles Myb-like domain profile. 104 162 IPR001005 -
Eupl08g00012 787 PANTHER FI21293P1 52 629 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 653 681 - -
Eupl08g00012 787 Pfam Myb/SANT-like DNA-binding domain 501 588 IPR044822 -
Eupl08g00012 787 Pfam Myb/SANT-like DNA-binding domain 104 190 IPR044822 -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 1 48 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 595 787 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 451 468 - -
Eupl08g00012 787 CDD GT1 501 566 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 416 468 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 290 328 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 637 651 - -
Eupl08g00012 787 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00012 Eupl-Chr8 953813 958164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00012 101 592 Trihelix Transcription Factor Family AT1G76890 46.521 9.69e-131 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl08g00012 Myb_DNA-bind_4 1.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00012 - - nnu:104592987 842.032