Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00007 ATGTTCCTCACTGTCTCTACAATCCAACTTCCAAGGCATTTTCCGCGTGTCGGAATGAAGCTCCATGCCATGGCCTTCTCTTTTACTAATAAATCTCGAAAAAAAATTTCAAAACCATTCAAGTCTAGATCTGTTGCTCTTGCTGGTCTCCCTCCCTGTACGTGGCGGTGGTGTTGGGTCTTCTTCTTCTTATCTTCCTCTTCCAACCTCCCCTTCTCTGCAGCTTCCCACACTCTACCCACCACCCCCACCAGTCTAGCACCGCCGCCTTTGTATTTAAAAACGAACGGAGGAGGAGGCGTCGACTCCCATTGGAGACTAATTGTAGTTCTCAGCGTCTCGGCTTTATTCCTCACTTTGGTGTTCCTTATGGCCTTCTTCAAGTTCCTAAGATCCAAGATCAGACGGAGATCCAGGCGCGTTGAGGATGTGGAGGAGCCAGCTGGGTTGCCCAAGACCCACCTTCCCGATCTGCCGGATTCAAATCCTCAGTCCCATTCTGGGGATCTGCTGTCTGAGAAGAATCCTTTTTCTTCAGTGAGGAGATTCTCTTGGGAAGAGATAGAGAAGCTCACCATGAATTTCTCACGTGAGATTGGCGAAGGAGGATTCAGCACCGTTTATCTCGCTTATTTTTCCGATTCGACTCTCGGAGCGGTCAAGATCCATAAGAACAGTGAGCGTCTCAGACGACTTTTTAAGCAGGAGCTTGAAGTCCTGCTTGAAGTCCGACATGACAACATCGTGAAGCTCCTTGGCTACTGTGATGAACGAGCAGAAGGTGTCTTGTTGTTCGAATACGTGTCCAACGGAAGCTTACATGAGAAACTCCACGATCAAGGAGGAAATGGAAATGGAAATGGAAGTGACCTGGTGCTCCCCTGGAAGAACCGCATGTCGATTGCGTTCCAACTTGCTCGAGCGATCGAGTACCTTCACGACAACTGCACACTTCAAATCGTTCACAGTGACGTCAAAGCTTCGAACGTGCTCCTCGATGAGCAACTCAACTGTAAGCTCTGCGATTTCGGGTTCGCGAAGATGGGGTTTTCATCGACAGTTCTACCGTCATCGCGGTCGACGAACCAGATGATGGGTTCACCCGGTTATATGGATCCTCACTACCTGAGAACCGGAATCGCCTCGAAAAAGAACGATGTTTATAGTTTCGGGGTGATGGTTCTGGAGCTGATCACAGGAATCGAAGCCTTCTGCACGGAGAAAGAGAAACTTCTGACGTCAATAGCTGGGCCAATGTTGAAAGATCCAAACAAGGTGGCGGAAATGGTGGATTCCCGACTGGCAGAAGATTTCAACGTGGAGGAAGCGATAACCATGGCTTCCATATCCGCACTCTGCCTTCGAGAACAACCCAGCTTGAGGCCTTCGATGGCTGAGATCTTACGGAACATGAGAGAGAAGATCTCGTCCGTCTCCTCTGTTACTGCCAAAACTGATGTGAAATTACTGTAA 1473 0.4902 MFLTVSTIQLPRHFPRVGMKLHAMAFSFTNKSRKKISKPFKSRSVALAGLPPCTWRWCWVFFFLSSSSNLPFSAASHTLPTTPTSLAPPPLYLKTNGGGGVDSHWRLIVVLSVSALFLTLVFLMAFFKFLRSKIRRRSRRVEDVEEPAGLPKTHLPDLPDSNPQSHSGDLLSEKNPFSSVRRFSWEEIEKLTMNFSREIGEGGFSTVYLAYFSDSTLGAVKIHKNSERLRRLFKQELEVLLEVRHDNIVKLLGYCDERAEGVLLFEYVSNGSLHEKLHDQGGNGNGNGSDLVLPWKNRMSIAFQLARAIEYLHDNCTLQIVHSDVKASNVLLDEQLNCKLCDFGFAKMGFSSTVLPSSRSTNQMMGSPGYMDPHYLRTGIASKKNDVYSFGVMVLELITGIEAFCTEKEKLLTSIAGPMLKDPNKVAEMVDSRLAEDFNVEEAITMASISALCLREQPSLRPSMAEILRNMREKISSVSSVTAKTDVKLL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00007 490 PANTHER OS01G0253100 PROTEIN 140 474 - -
Eupl08g00007 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Eupl08g00007 490 SUPERFAMILY Protein kinase-like (PK-like) 171 469 IPR011009 -
Eupl08g00007 490 Gene3D Transferase(Phosphotransferase) domain 1 268 488 - -
Eupl08g00007 490 MobiDBLite consensus disorder prediction 158 173 - -
Eupl08g00007 490 Gene3D Phosphorylase Kinase; domain 1 169 267 - -
Eupl08g00007 490 ProSiteProfiles Protein kinase domain profile. 193 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00007 490 Pfam Protein kinase domain 195 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00007 490 SMART serkin_6 193 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00007 490 FunFam Os07g0541700 protein 285 367 - -
Eupl08g00007 490 MobiDBLite consensus disorder prediction 141 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00007 Eupl-Chr8 807637 809448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00007 172 479 Receptor kinase-like Gene Family AT1G33260 47.401 1.68e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XIII Eupl08g00007 Pkinase 6.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00007 - - msin:131248761 485.337