Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01799 ATGGCTTCTCGTTCTTTGAGCTCTTCTTCATGGACTGCCAAGCAGAACAAGTCGTTCGAGAGGGCGCTGGCCATATTCGATAAGGACACCCCTGATCGTTGGGACAATGTGGCGTCCATGGTAGGCGGTGGCAAATCCTCGGAGGAAGTGAAGCAACACTACGAGGACCTGGTCGAGGACTTGAAGTGCATCGAGTCCGGCCAGGTTCCCTTCCCAAACTACAAACCCACCCCAACTAAGGCCAACGGGAAGCCTTCTCACCTCACAGAAGACGACCGCAGGCATATGATGTATCTCAAGTTACAGTGA 309 0.534 MASRSLSSSSWTAKQNKSFERALAIFDKDTPDRWDNVASMVGGGKSSEEVKQHYEDLVEDLKCIESGQVPFPNYKPTPTKANGKPSHLTEDDRRHMMYLKLQ* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01799 102 SMART sant 7 60 IPR001005 -
Eupl07g01799 102 FunFam Transcription factor SRM1 3 71 - -
Eupl07g01799 102 CDD SANT 11 58 IPR001005 -
Eupl07g01799 102 MobiDBLite consensus disorder prediction 69 89 - -
Eupl07g01799 102 SUPERFAMILY Homeodomain-like 9 66 IPR009057 -
Eupl07g01799 102 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 82 IPR044636 GO:0003700
Eupl07g01799 102 Gene3D - 1 71 - -
Eupl07g01799 102 ProSiteProfiles SANT domain profile. 6 62 IPR017884 -
Eupl07g01799 102 ProSiteProfiles Myb-like domain profile. 3 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01799 Eupl-Chr7 40069833 40071019 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl07g01799 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01799 - - msin:131225149 135.576