Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01766 ATGGCTTTTGCATTCTCTGTGGGAACGGCGACTGGCTCTGTTTTACAGAGCGGCTTCCATCACGATGTTCCAGATGTGCGTAAGCCCCGGATAATTTCTCGCCTTGCAACTTTGCAGACGAAATGCCCCAGAATTCCATCTGTGGGCTGTCTTATGAGAGGATTGTCATCGCATTCTCAATATGCTTCACGCCTTCCTATTGAACAAATTTCTAAAGCAGCACCTGCAGTTGGACACCAGAGTATGGTGTGCACCAATTCTATGGCAAAAGGTCTAGAGCTGCAAGCCAAAGTAACAACAAAGTGCTTCTTTGATGTTGAAATCGGGGGTGAGCCTGTCGGTAGGATTGTAATGGGCCTCTTTGGAGAGGTTGTCCCAAAAACCGTTGAGAACTTTCGTGCCTTGTGCACAGGGGAGAAAGGATATGGCTATAAGGGATGCTCCTTCCACCGTATTATTAAAGATTTTATGATCCAGGGTGGGGACTTCACTAAAGGAAATGGGACTGGAGGAATTAGCATCTATGGTTCTAGTTTTGAAGATGAGAACTTCACCTTAGAGCACGTTGGACCTGGTGTATTGAGCATGGCTAACGCGGGTCCTGATACCAATGGAAGCCAGTTTTTCATCTGCACAGTAAAGACTCCATGGTTGGATAAACGCCATGTTGTGTTTGGACATGTCATTGAGGGAATAGAAGTCATCCAGAAGCTTGAATCCCAAGAAACGAGCAGATCAGACGTTCCCCGGTTGCCGTGCAGGATTATCAACTGTGGAGAGCTGCCCGTGGAAGGCTGA 798 0.4724 MAFAFSVGTATGSVLQSGFHHDVPDVRKPRIISRLATLQTKCPRIPSVGCLMRGLSSHSQYASRLPIEQISKAAPAVGHQSMVCTNSMAKGLELQAKVTTKCFFDVEIGGEPVGRIVMGLFGEVVPKTVENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTKGNGTGGISIYGSSFEDENFTLEHVGPGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVIEGIEVIQKLESQETSRSDVPRLPCRIINCGELPVEG* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01766 265 Gene3D - 90 264 IPR029000 -
Eupl07g01766 265 SUPERFAMILY Cyclophilin-like 97 261 IPR029000 -
Eupl07g01766 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 161 IPR002130 GO:0000413|GO:0003755
Eupl07g01766 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 192 207 IPR002130 GO:0000413|GO:0003755
Eupl07g01766 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 IPR002130 GO:0000413|GO:0003755
Eupl07g01766 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 207 219 IPR002130 GO:0000413|GO:0003755
Eupl07g01766 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 220 235 IPR002130 GO:0000413|GO:0003755
Eupl07g01766 265 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 144 161 IPR020892 GO:0003755|GO:0006457
Eupl07g01766 265 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 101 261 - -
Eupl07g01766 265 FunFam Peptidyl-prolyl cis-trans isomerase 88 265 - -
Eupl07g01766 265 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 104 259 IPR002130 GO:0000413|GO:0003755
Eupl07g01766 265 CDD cyclophilin_ABH_like 101 259 - -
Eupl07g01766 265 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 103 260 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01766 Eupl-Chr7 39741643 39748109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01766 114 258 U-box Gene Family AT5G67530 45.890 2.00e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01766 K03768 - nnu:104585598 419.468