Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01743 ATGGGAAGAACTACCAATTCTTCTTCATCATCAATCGATAGTAGCAGTCACCCAACTCTCTCGTCTGCATCTTCTCTACATCGATCAAAGAGAGACTTGAGCACAGATCTTAGACTTGGACTCAGCATTTCAACCTCTCAACATAACAGGGAGCAGCCATCGGATTGGCCACCGATCAAACAACTCCTGAGGAGTGCACTTGCAGAGAAAGGAAATAACGAGCATCGGCCCACCTTCTTTGTAAAGGTTTACATGGAAGGAATTCCAATTGGGAGGAAACTGGATCTGTTTGCCCATGAAGGTTATGAGGGCCTAATAAGGACTCTTGGTCATATGTTCAAGACCACCATTCTCTTCCCTGATATTGATGGAGGAGTACATTCTGATCAACATCATGTGTTGACTTATGAAGACAAAGAAGGGGACTGGATGATGGTGGGGGATGTTCCTTGGGATCTGTTCTTAACTACTGTGAAGAGATTGAAGATCACAAGAGCTGACAAATGCTAG 510 0.4431 MGRTTNSSSSSIDSSSHPTLSSASSLHRSKRDLSTDLRLGLSISTSQHNREQPSDWPPIKQLLRSALAEKGNNEHRPTFFVKVYMEGIPIGRKLDLFAHEGYEGLIRTLGHMFKTTILFPDIDGGVHSDQHHVLTYEDKEGDWMMVGDVPWDLFLTTVKRLKITRADKC* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01743 169 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 33 167 IPR003311 GO:0005634|GO:0006355
Eupl07g01743 169 MobiDBLite consensus disorder prediction 1 31 - -
Eupl07g01743 169 Pfam AUX/IAA family 47 165 IPR033389 -
Eupl07g01743 169 Gene3D - 72 169 - -
Eupl07g01743 169 ProSiteProfiles PB1 domain profile. 78 168 IPR000270 GO:0005515
Eupl07g01743 169 MobiDBLite consensus disorder prediction 1 28 - -
Eupl07g01743 169 SUPERFAMILY CAD & PB1 domains 74 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01743 Eupl-Chr7 39514194 39515494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01743 82 163 B3 DNA Binding Superfamily AT4G23980 41.463 3.86e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Eupl07g01743 AUX_IAA 2e-30 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01743 K14484 - vvi:100241721 251.521