Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01730 ATGGAAAGACGCCGGGAAATGACACTCTTACACCCCGTCGACTTCATCCGCCCGAATCCCGGTGTCTCCGATCACGTAATTGAGAATTCCATCGATCGGAAGCACACGATACAAGAAATGGATTTCTTCTCCGATAATCATAAACGGGTCGAAGTCAGATCCGATAATCAGCCCCAGGATCAGGAGAAGAAGGATGAATCGATCCGTAACCAACCTGGCATGAACACTGGATTGCATTTTCTTGCTCTCAATTCAGGAATCGAACGATCGACAGTTGACGAGAAACCCAAGATCCAGATGAGTAAGCTTCGAGTTGAGCTAGATCGATTGAACGATGAGAATCAGAAGCTAAGAAGCATGTTGGATCAGATAACCAACAATTACAATGTCCTCCAGAGTCAGCTACTTGTAGCGATGCAGCAACAAGCAGCCAAGAATCGACAAGAACAGAAGGATGAGAGAAATGGCATATCAAGTCCAACATTGTCTGCCCAACAGTTCATGGACCCCGGTCCATCTGGTGGACTAGATATTGATGAACCTTCTCACTCTGATGACAACACCCAAGAACCAGTGGCTTCTCCAACTAAGAACATCGAAGAAGTGATGTCGAAGGAACACGATCAGATTGCAAGGAAGCGACCATCCATCCAAGATAGTCCTGATCAGACGTCCCAAACCTGGGGTGGGCACAAGAGTCTCAAGATAGCACAACCTAAAACCGTGGAACAAGTTTCCGACGTCCCTTGTCGGAAGGCGAGAGTGTCTGTACGAGCCCGATCAGATGCGCCTATGATAAGCGATGGTTGTCAATGGCGAAAATATGGTCAAAAGATGGCAAAGGGTAACCCTTGTCCACGTGCTTATTACCGCTGCACCATGGCTGTTGGATGCCCAGTTCGTAAGCAGGTGCAAAGATGTGCGGAGGACAAGACGATTCTGATAACAACCTATGAAGGAAACCACAACCATCCTCTCCCTCCTGCAGCAACAGCCATGGCTAACACAACGTCGGCAGCTGCAACCATGCTCCTCTCGGGTTCGACCACTAGCAAGGACACTACTATACCAAATTCTGCCTTCTTCTCACCTTTCTCATATCCATCCACCATGGCCACCCTATCTGCATCTGCTCCTTTTCCCACCATCACACTCGACCTGACCCAAACTCCAAACCCCATGCAATTCCAACGACCTCCACCTCCCTCAACACCCTTTTCCCTACCCTTTCAGGGCTTCCCACAACACATGTTCCTCCCCTCTAAAATGCCAGTTGTCCAACTCGGACAACAACGACACCCCATGGTTGAGACCGTCACTGCAGCTATAGCCACGGACCCTAAATTCACTGCAGCCCTAGCTGCAGCCATATCATCGATTATAAGTGCACCCCGGAGCAATGAAGCCGCTAACAACAGTTCTCCCTCTCCGTTGAAACTTTTGATTCGATTCGTGCCTAATTTCTCTCCTTTTGCTAACCCTTTGATCAGAATCCTGTATTCTCTGATAATCCGGACTAATCGAGTCCTTCTAGCTTCGATTTTACTGGTTCGTTCTCACGTTTTTGGACTTACAGTGTTGATTCTAGGGGAATTCAAAATGGACAACAGATGGTACAATAGCAGACAGGAAACTAGCACACAAGATAAACGACAACGTGAAAGAGAGAAGGCATATGAGGATTCCCTTGTTGAGGATCTGGAAGAGGATTTTCGTCTGCCAATTAATCACAAGCCCACAGAAAATCTTGATCTAGATAACGTGGAGCAAGCATCTTTGGACATGCAACTAACATCGTCTAACGTAGGATTTAGGCTTCTCCAAAAAATGGGGTGGAAAGGGAAGGGCCTTGGCAAAGATGAGCAAGGAATAGTTGAGCCAATAAAAGCTGGGATTAGAGATCCTAAATTAGGAGTTGGGAAGCAAGAGCAGGATGATTTTTTTACTGCTGAAGAGAATGTTCAACGTAAGAAACTTGACATTGAGTTAGAGGAGACCGAGGAGCATGCAAAGAAGCGGGAGGTGATAGCAGAGCGTGAGCAGAAAATTCAAACTGAGGTGAAAGAAATACGTAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAGTTGGCCATGGAATTTGAAGTTCACCTGAGCTCATACGACCACAATCACAGAAAGCGGTTCAAAGAAATGAAAGAAATGCATGGTAGTAGCAGTCGAGATGAACGACAAAAACGAGAACAATTACGTCAGGAAAGGGAGATGGCCAAGTTTGCTCAGATTGCGGATGCCCATAAGCAACAGCAGCAACAACAGCAACAACAAGAACAATCTGAGGCTGCACCTGCTTCCTCCACATTGAGAAGTGCCTCTGCACTTGCAGATCCGGATCAGAGAAAGACATTGAAGTTTGGCTTTTCCTCTAAACCTGGTCTATCCAAGAACTCATTCGGTGGTGCTGCAAAGAAGACAAAAGTAGCTGCCCAGGTATCCTCAGTTTTCGGCAATGACAGCGATGAAGAATAG 2514 0.4662 MERRREMTLLHPVDFIRPNPGVSDHVIENSIDRKHTIQEMDFFSDNHKRVEVRSDNQPQDQEKKDESIRNQPGMNTGLHFLALNSGIERSTVDEKPKIQMSKLRVELDRLNDENQKLRSMLDQITNNYNVLQSQLLVAMQQQAAKNRQEQKDERNGISSPTLSAQQFMDPGPSGGLDIDEPSHSDDNTQEPVASPTKNIEEVMSKEHDQIARKRPSIQDSPDQTSQTWGGHKSLKIAQPKTVEQVSDVPCRKARVSVRARSDAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAATAMANTTSAAATMLLSGSTTSKDTTIPNSAFFSPFSYPSTMATLSASAPFPTITLDLTQTPNPMQFQRPPPPSTPFSLPFQGFPQHMFLPSKMPVVQLGQQRHPMVETVTAAIATDPKFTAALAAAISSIISAPRSNEAANNSSPSPLKLLIRFVPNFSPFANPLIRILYSLIIRTNRVLLASILLVRSHVFGLTVLILGEFKMDNRWYNSRQETSTQDKRQREREKAYEDSLVEDLEEDFRLPINHKPTENLDLDNVEQASLDMQLTSSNVGFRLLQKMGWKGKGLGKDEQGIVEPIKAGIRDPKLGVGKQEQDDFFTAEENVQRKKLDIELEETEEHAKKREVIAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEVHLSSYDHNHRKRFKEMKEMHGSSSRDERQKREQLRQEREMAKFAQIADAHKQQQQQQQQQEQSEAAPASSTLRSASALADPDQRKTLKFGFSSKPGLSKNSFGGAAKKTKVAAQVSSVFGNDSDEE* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01730 837 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 534 837 - -
Eupl07g01730 837 Coils Coil 100 134 - -
Eupl07g01730 837 MobiDBLite consensus disorder prediction 200 215 - -
Eupl07g01730 837 MobiDBLite consensus disorder prediction 759 788 - -
Eupl07g01730 837 FunFam probable WRKY transcription factor 31 251 328 - -
Eupl07g01730 837 Gene3D WRKY domain 251 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl07g01730 837 MobiDBLite consensus disorder prediction 727 756 - -
Eupl07g01730 837 SMART G-patch_5 597 642 IPR000467 GO:0003676
Eupl07g01730 837 MobiDBLite consensus disorder prediction 52 76 - -
Eupl07g01730 837 MobiDBLite consensus disorder prediction 216 232 - -
Eupl07g01730 837 MobiDBLite consensus disorder prediction 727 837 - -
Eupl07g01730 837 SUPERFAMILY WRKY DNA-binding domain 259 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl07g01730 837 ProSiteProfiles G-patch domain profile. 599 644 IPR000467 GO:0003676
Eupl07g01730 837 MobiDBLite consensus disorder prediction 52 69 - -
Eupl07g01730 837 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g01730 837 MobiDBLite consensus disorder prediction 142 234 - -
Eupl07g01730 837 Pfam G-patch domain 600 640 IPR000467 GO:0003676
Eupl07g01730 837 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g01730 837 ProSitePatterns Zinc finger C2H2 type domain signature. 696 718 IPR013087 -
Eupl07g01730 837 Pfam WRKY DNA -binding domain 268 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01730 Eupl-Chr7 39384531 39401591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01730 534 837 C2H2 Transcription Factor Family AT5G26610 66.993 1.56e-119 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl07g01730 WRKY 7.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01730 - - nnu:104613528 573.548