Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01716 ATGGCCGAGGAGAACGGCCTGGTTGGTGATACAAACATACACCAGGCCACTGCATCAACAAGTCAGTCAACTGTAATAGAGACAGATAAAAGCTCAGGAACGACAGGTAATCGACAAGAGTCGGAGAAGAGCAAGGAAGGAGAGGAGAAGATTAAAACTGTTCCGTATTACAAGCTATTCTTCTTTGCGGACTCAAAAGATGTTGCGCTGATGGTCATTGGTACGATTGCGGGTGTTGCAAATGGAATGTGCATGCCACTTATGACCCTTCTCATCGGAGAGCTGATCGACTCTTTTGGACAAACCGCAGGCAGCAAAAATGTGGTTCGTGAAGTTTCTAAGGTGGCACTGAAATTTGTTTATTTGGCTGTGGGGGCTGGTGTTGCATCATTCTTTCAGGTGGCTTGCTGGATGGTCACAGGGGAGAGACAGGCTGCACGAATAAGGAGTTTATACTTGAAAACTATATTGAGGCAAGATATCTCTTTCTTTGATAAGGAAACAAACACAGGAGAAGTTGTTGGGAGGATGTCAGGTGACACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTTGGCAAGTTTATACAGCTGATTGCGACATTCATAGGAGGCTTTGTAATAGCATTCATCAAAGGGTGGCTTCTCACCCTTGTCATGTTATCCTCTATTCCACCTCTTGTGATCTCTGGTGCTGCCATGTCCATCTTTATAACCAAGATGGCATCTCGTGGACAAACTGCATACTCTCAAGCAGGGATTGTCGTAGAACAGACGATCGGCTCAATCAGAACAGTTGCATCATTTACTGGGGAGAAGCAAGCTATAACTAAATATGAGAAGTCTCTAGCGAGTGCTTATACGTCTGGTGTTCACGAGGGCATGGCTTCCGGATTAGGTCTTGGTGCTGTTATGGGTGTCATATTCTGCAGTTATGCTTTGGCCATATGGTTTGGTGCAAAGATGATACTCGACAAAGGGTATACAGGGGGTGATGTCATTAACGTAATTGTTGCCGTGTTGACTGGCTCCTTGTCTCTAGGGCAGGCATCTCCATGCCTGGGTGCATTTGCCGCTGGACAAGCTGCAGCATTCAAGATGTTCGAGACAATCAATAGGAAGCCAGAGATAGATGCATATGACACCAAGGGGCGTACATTGGATGATATTCGTGGAGATATTGAGCTGAGGGATGTTTGCTTCAGTTATCCGGCTAGACCAGATGAGCAAATATTCAATGGGTTCTCTTTCTCCATACCTAGTGGCACAACTGCAGCTTTGGTTGGACAGAGTGGAAGCGGAAAGTCAACAGTTATCAGTCTAATAGAGAGATTTTATGATCCACAAGCTGGTGAAGTTCTTATAGATGGAATAAATCTCAAGGAGTTTCAGCTGAAATGGATCAGAGAGAAAATTGGGCTTGTTAGCCAGGAACCTGTGCTATTTGGTTCTAGCATTAAAGATAATATCGCCTATGGGAAGGATGGTGCAACTCTTGAAGAAATAAGAGCTGCATCTGAGCTTGCCAATGCTGCCAAATTCATAGATAAACTACCTCAGGGACTAGACACCTTGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGTCAGAAGCAGAGAGTTGCCATAGCTAGAGCAATTCTAAAAGACCCACGAATTCTACTTCTAGATGAAGCTACCAGTGCACTTGATGCGGAGTCTGAGCGGATTGTGCAAGAGGCGTTGGACAGGGTCATGGTCAACCGAACTACTGTCGTTGTTGCTCATCGTTTGAGCACAGTGAGGAACGCTGATATGATTGCGGTCATTCATCGAGGAAAGATCGTTGAAAAAGGTTCACACTCAGAGCTCCTGAAGGATCCAGATGGAGCATACTGCCAGCTTATACGCTTGCAAGAAATAAGCAGAGAGTCGGAACACAAAGCCATAAATGATGAAGAGAAGCCAGAAATTACACTGGAGGTCAGCAGGCACTCGAGCCAGCGGATGTCTTTACTACGATCCATAAGTCGGGGATCATCTGGGGTTGGAAACAGCAGCCGCCACTCTTTTTCAGTCTCATTTGGTGTACCTACAGGACTCAACATCCAAGAAACTGCACCAATAGAACCCAACACTTCTCGCCAACGACCTATGGAAAAGGAACATGAAGTTCCACTCCGTCGCCTTGCCTATCTCAACAAGCCGGAGATCCCCGTTCTAATACTTGGTGTTATATCTGCCGTTGTCAATGGAGTCATATTTCCAGTTTTCGGTATACTCCTTTCTGGTATAATCAATACGTTCTATGAGCCACCAAGTGAGCTTCGGAAGGATTCAAAGTTTTGGGCGTTGATGTTTGTCGTCCTTGGCCTGATAACGTTAGTGGCCTCCCCGGCGAGAACGTACTTCTTTGCCGTGGCCGGGTGTAGGTTAATAAAACGGATTCGGTCAATGTGCTTTGAAAAGGTGGTTCACATGGAGGTGAGTTGGTTTGATGAGCCCGAGCACTCTAGTGGTGCTATTGGTGCTAGGCTATCTGCAGATGCAGCAACTGTGCGCAGTCTGGTGGGGGATGCACTTGCTCTCCTTGTTCAGAACACGGCAACAGCAGTTGCTGGTTTGGCTATCGCTTTTGAAGCAAACTGGCAATTGGCTCTCATTGTCCTTGTTTTGCTACCTCTGATAGGACTTAATGGATGGGTTCAGATGAAATTCATGACAGGATTCAGTGCGGACGCTAAGATGATGTACGAGGAAGCAAGTCAAGTTGCTAACGACGCGGTTGGGAGCATAAGGACAGTTGCTTCGTTCTGTGCTGAAGAGAAGGTGATGCAATTGTACCAAAAGAAATGTGACGGCCCAATGAAAACAGGGATAAGGCAAGGGTTAATTAGCGGAGTTGGTTTTGGGGTCTCCTTTTTCTTGCTGTTTTGTGTCTACGCAGCCAGTTTCTATGCTGGAGCCCGACTTGTTGATGATGGCAAGACAACATTCGCGAAGGTTTTCCGTGTTTTCTTTGCTCTCACCATGGCAGCAATTGGAATTTCTCAATCGAGCTCCTTAGCACCAGATTCCAGTAAAGCCAAGGCTTCTACTGCTTCCATCTTTTCAATTCTTGACCGTAAGTCAAAGATAGACCCGAGTGATGACTCTGGAATGACATTAGAAAATGTAAAGGGTGAAATTGAGTTTCGGCATGTCAGTTTTAAGTACCCTACAAGGCCTGACATTCAGATTTTCCAGGATCTCTGCTTGGCCATTCACTCTGGCAAGACAGTTGCACTGGTTGGAGAGAGTGGCAGTGGGAAGTCAACGGCGATCTCATTGTTGCAGAGATTTTACGACCCTGATTCAGGTCACATTACACTAGATGGCATTGAAATTCAGAAATTCCAATTGAGGTGGTTGAGGCAGCAGATGGGTCTTGTGAGCCAAGAACCTGTGTTGTTCAACGACACAATCCGAGCCAACATTGCATATGGAAAGAAAGGAAATGCGTCAGAGACGGAGATTTTAGCCGCAGCAGAGTTAGCAAATGCCCACAAGTTCATCAGTGGGTTGCAACAGGGGTATGATACAATAGTAGGAGAGCGAGGAATTCAGTTATCAGGTGGGCAGAAGCAACGGGTGGCAATCGCGCGTGCTATGGCGAAAGAGCCAAAGATATTACTACTAGATGAGGCGACAAGCGCACTTGATGCTGAATCCGAACGAGTGGTTCAAGATGCACTGGACCGAGTCATGGTGAACCGGACCACAGTTGTGGTGGCCCACCGATTATCCACAATTAAAAATGCGGATGTAATCGCAGTGGTAAAAAATGGGGTAATTGCAGAAAAAGGAAAGCATGAGACATTAATCAATATCAAAGACGGAGTTTATGCATCCTTAGTAGCACTTCACATGAGTGCTGCATCATAG 3903 0.4612 MAEENGLVGDTNIHQATASTSQSTVIETDKSSGTTGNRQESEKSKEGEEKIKTVPYYKLFFFADSKDVALMVIGTIAGVANGMCMPLMTLLIGELIDSFGQTAGSKNVVREVSKVALKFVYLAVGAGVASFFQVACWMVTGERQAARIRSLYLKTILRQDISFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFIQLIATFIGGFVIAFIKGWLLTLVMLSSIPPLVISGAAMSIFITKMASRGQTAYSQAGIVVEQTIGSIRTVASFTGEKQAITKYEKSLASAYTSGVHEGMASGLGLGAVMGVIFCSYALAIWFGAKMILDKGYTGGDVINVIVAVLTGSLSLGQASPCLGAFAAGQAAAFKMFETINRKPEIDAYDTKGRTLDDIRGDIELRDVCFSYPARPDEQIFNGFSFSIPSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLKWIREKIGLVSQEPVLFGSSIKDNIAYGKDGATLEEIRAASELANAAKFIDKLPQGLDTLVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRVMVNRTTVVVAHRLSTVRNADMIAVIHRGKIVEKGSHSELLKDPDGAYCQLIRLQEISRESEHKAINDEEKPEITLEVSRHSSQRMSLLRSISRGSSGVGNSSRHSFSVSFGVPTGLNIQETAPIEPNTSRQRPMEKEHEVPLRRLAYLNKPEIPVLILGVISAVVNGVIFPVFGILLSGIINTFYEPPSELRKDSKFWALMFVVLGLITLVASPARTYFFAVAGCRLIKRIRSMCFEKVVHMEVSWFDEPEHSSGAIGARLSADAATVRSLVGDALALLVQNTATAVAGLAIAFEANWQLALIVLVLLPLIGLNGWVQMKFMTGFSADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMQLYQKKCDGPMKTGIRQGLISGVGFGVSFFLLFCVYAASFYAGARLVDDGKTTFAKVFRVFFALTMAAIGISQSSSLAPDSSKAKASTASIFSILDRKSKIDPSDDSGMTLENVKGEIEFRHVSFKYPTRPDIQIFQDLCLAIHSGKTVALVGESGSGKSTAISLLQRFYDPDSGHITLDGIEIQKFQLRWLRQQMGLVSQEPVLFNDTIRANIAYGKKGNASETEILAAAELANAHKFISGLQQGYDTIVGERGIQLSGGQKQRVAIARAMAKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIAEKGKHETLINIKDGVYASLVALHMSAAS* 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01716 1300 FunFam ABC transporter B family member 1 384 633 - -
Eupl07g01716 1300 Gene3D - 1046 1299 IPR027417 -
Eupl07g01716 1300 Pfam ABC transporter 1075 1224 IPR003439 GO:0005524
Eupl07g01716 1300 Gene3D - 392 645 IPR027417 -
Eupl07g01716 1300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 632 IPR027417 -
Eupl07g01716 1300 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1056 1293 IPR003439 GO:0005524
Eupl07g01716 1300 FunFam ABC transporter B family member 1 1046 1296 - -
Eupl07g01716 1300 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 394 630 IPR003439 GO:0005524
Eupl07g01716 1300 FunFam ABC transporter B family member 9 1023 1045 - -
Eupl07g01716 1300 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 72 359 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl07g01716 1300 SUPERFAMILY ABC transporter transmembrane region 715 1041 IPR036640 GO:0005524|GO:0016020
Eupl07g01716 1300 FunFam ABC transporter B family member 1 714 1022 - -
Eupl07g01716 1300 Pfam ABC transporter transmembrane region 71 345 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl07g01716 1300 Pfam ABC transporter transmembrane region 734 1006 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl07g01716 1300 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 735 1021 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl07g01716 1300 Coils Coil 1296 1300 - -
Eupl07g01716 1300 ProSitePatterns ABC transporters family signature. 1196 1210 IPR017871 GO:0005524|GO:0016887
Eupl07g01716 1300 MobiDBLite consensus disorder prediction 1 47 - -
Eupl07g01716 1300 SUPERFAMILY ABC transporter transmembrane region 59 378 IPR036640 GO:0005524|GO:0016020
Eupl07g01716 1300 Pfam ABC transporter 413 561 IPR003439 GO:0005524
Eupl07g01716 1300 CDD ABC_6TM_Pgp_ABCB1_D2_like 724 1039 - -
Eupl07g01716 1300 Gene3D ABC transporter type 1, transmembrane domain 117 1030 IPR036640 GO:0005524|GO:0016020
Eupl07g01716 1300 FunFam ABC transporter B family member 9 58 390 - -
Eupl07g01716 1300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1045 1294 IPR027417 -
Eupl07g01716 1300 ProSitePatterns ABC transporters family signature. 533 547 IPR017871 GO:0005524|GO:0016887
Eupl07g01716 1300 CDD ABC_MTABC3_MDL1_MDL2 394 632 - -
Eupl07g01716 1300 MobiDBLite consensus disorder prediction 10 38 - -
Eupl07g01716 1300 PANTHER ABC TRANSPORTER B FAMILY 37 635 IPR039421 -
Eupl07g01716 1300 SMART AAA_5 1083 1256 IPR003593 GO:0016887
Eupl07g01716 1300 SMART AAA_5 421 614 IPR003593 GO:0016887
Eupl07g01716 1300 CDD ABC_MTABC3_MDL1_MDL2 1056 1292 - -
Eupl07g01716 1300 CDD ABC_6TM_Pgp_ABCB1_D1_like 71 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01716 Eupl-Chr7 39231921 39239990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01716 64 636 Calmodulin-binding Proteins AT2G36910 37.153 5.88e-115 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01716 K05658 - nnu:104607165 2110.49