Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01712 ATGGAAAGAGAGCCATTTCTTGCCTCCCCAACAAAATCCCATCTGGAAAATCTTCTCCAAGATGAAGAAATTTCATTCAAGATCCCTCAATCCATCAAGAACCAAGTTATCTTCGAAGAAATCGAAGGCCCATTTGGAGATTCCGTCTCTCACTCCCCACAGCACCTTGAAGGAACTTCAAACGAGTTCAGACCACCGAATGCCCGCAAAAAGAACGGTCTCCACCGCTGCAAGACTGCTCCGGCCATGGCGATCATGACAGACCTTCAACAACATCCACCCCGGATGGAGAAACCAAAAATTGAGTCCAATTCCATTATCAGACAGGCGTTTTTCTTACTAATGATTTATCTATCTCTCGGAGTCGGAATCTATTCGTTCAATCCAGAGAAGTTCTCTGGTATCGAGACCCACCCGATCGTTGATGCGATTTACTTCTGTATCGTCACTATGTGCACAATTGGGTACGGCGATATTGCTCCGTTGACACCGGCGACGAAGGTGTTTTCTTGTGTGTTTGTGTTGGTGGGGTTTGGGTTTATAGATATATTGTTGAGTGGAGTTGTGAATTATGTGCTGGATTTGCAGGAAAGTATGATCTTGACTAGCATTCGAGTCAGTGGTGGCAATGGGGGATTCTCTGCTAAGAACTACATTTTTGATGTAGAGAAGGGTAGGATGAGAATAAGGATGAAGGTGGGGTTGGCACTTGGGGTAGTCGTACTATGTATCAGCACAGGGACTATGATCTTGTATTTTGTGGAGAATTTGGACTTGATCGATTCATTTTATTTGTCAGTTATGTCAGTTACTACTGTTGGGTATGGGGATAGAGCCTTCAAGACGTTGCCTGGTCGGTTGTTTGCTTCGGTTTGGCTTCTGTTCTCGACCTTGGCGGTGGCTCGCTCGTTTCTATATTTAGCGGAGGCAAGGATTGATAAGAGGCACAGACGAATTGCGAAGTGGGTGTTGCATCGAGAAATCACTGTGAAGGATTTTCTCGCAGCGGATACCAATAACCATGGCTTCATCAGTAAATCAGATTATGTGATATACAAGCTCAAAGAGATGGGAAAGATTGGCGAGAAAGATATAATGCAGATCTGCACCCAGTTCAACAAGCTCGACCCCAACAACTCAGGGAAGATAACGCTCCCCGATCTCTTGGAGAGTCGTAGATGA 1182 0.4518 MEREPFLASPTKSHLENLLQDEEISFKIPQSIKNQVIFEEIEGPFGDSVSHSPQHLEGTSNEFRPPNARKKNGLHRCKTAPAMAIMTDLQQHPPRMEKPKIESNSIIRQAFFLLMIYLSLGVGIYSFNPEKFSGIETHPIVDAIYFCIVTMCTIGYGDIAPLTPATKVFSCVFVLVGFGFIDILLSGVVNYVLDLQESMILTSIRVSGGNGGFSAKNYIFDVEKGRMRIRMKVGLALGVVVLCISTGTMILYFVENLDLIDSFYLSVMSVTTVGYGDRAFKTLPGRLFASVWLLFSTLAVARSFLYLAEARIDKRHRRIAKWVLHREITVKDFLAADTNNHGFISKSDYVIYKLKEMGKIGEKDIMQICTQFNKLDPNNSGKITLPDLLESRR* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01712 393 SUPERFAMILY EF-hand 328 389 IPR011992 -
Eupl07g01712 393 MobiDBLite consensus disorder prediction 48 72 - -
Eupl07g01712 393 Pfam Ion channel 113 192 IPR013099 -
Eupl07g01712 393 Pfam Ion channel 240 308 IPR013099 -
Eupl07g01712 393 Gene3D - 238 302 - -
Eupl07g01712 393 FunFam Two-pore potassium channel 3 216 330 - -
Eupl07g01712 393 Gene3D - 95 203 - -
Eupl07g01712 393 ProSitePatterns EF-hand calcium-binding domain. 376 388 IPR018247 -
Eupl07g01712 393 PRINTS Two pore domain K+ channel signature 149 177 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl07g01712 393 PRINTS Two pore domain K+ channel signature 271 280 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl07g01712 393 Gene3D - 303 393 - -
Eupl07g01712 393 SUPERFAMILY Voltage-gated potassium channels 224 332 - -
Eupl07g01712 393 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 138 367 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl07g01712 393 SUPERFAMILY Voltage-gated potassium channels 107 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01712 Eupl-Chr7 39173955 39178174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01712 28 389 Ion Channels AT4G01840 64.533 1.25e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01712 K05389 - nnu:104586054 583.178