Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01683 ATGAGTTGCTTCAGCTGCTGCTGCGAAGATGATTTCCATAAAACCGCTGACAGTGAAGGCCCATTCAAGGCGAACAATTTAGCAGGCAATGATGGAGGATATCATCACACAGATCCAGCAACTAAGGTTGCACAGACTGTAAAAGTCCAGCCTATTGAAGTCCCCACCATATCAGTAGATGAACTGAAGGAAGTGACCGATAACTTTGGGACAAAGGCTTTAATTGGAGAGGGTTCATATGGGAGAGTGTATTACGGGGTTCTGAAAAGTGGGCAGGCTGCAGCCATAAAAAAGTTAGATGCCAGTAAGCAACCAGACCAAGAATTTTTAGCGCAGGTGTCCATGGTATCGAGGTTGAAACATGAACATGTTGTTGAGCTGATTGGTTATTCTGTTGACGGAAGTCTTCGTGTCCTTGCTTATGAATTTGCTACCATGGGATCCCTTCATGATATTCTTCATGGGCGGAAAGGTGTCAAAGGAGCACAACCAGGTCCAGTTCTATCATGGGCACAACGAGTAAAAATTGCTGTAGGTGCAGCAAAAGGACTTGAATACTTACACGAAAAGGCACAGCCTCACATTATTCATCGTGACATAAAGTCCAGCAATGTACTAATTTTCGATGATGACATTGCTAAGATTGCTGATTTTGACTTGTCAAATCAAGCTCCTGACATGGCCGCACGCCTTCATTCCACTCGTGTTCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACCGGACAGCTGAGTTCAAAGAGTGATGTTTACAGCTTCGGTGTTGTCCTGTTGGAGCTCTTGACTGGCCGTAAACCTGTTGATCATACATTACCAAGAGGGCAGCAGAGTCTAGTGACATGGGCAACACCAAGACTTAGCGAAGACAAGGTGAGGCAATGTGTTGACCAAAGACTAGGAGGAGAATACCCTCCCAAGGCAGTTGCAAAGATGGCTGCTGTAGCTGCCCTGTGTGTGCAATACGAAGCTGATTTTCGGCCAAACATGAGCATTGTAGTCAAAGCTCTCCAACCTCTGTTAAATGCTCGGTCTGGACCTCCTGGTCCTGGTGAAACCACAGCCTTGTGA 1095 0.4584 MSCFSCCCEDDFHKTADSEGPFKANNLAGNDGGYHHTDPATKVAQTVKVQPIEVPTISVDELKEVTDNFGTKALIGEGSYGRVYYGVLKSGQAAAIKKLDASKQPDQEFLAQVSMVSRLKHEHVVELIGYSVDGSLRVLAYEFATMGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNVLIFDDDIAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVRQCVDQRLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARSGPPGPGETTAL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01683 364 Gene3D Phosphorylase Kinase; domain 1 33 143 - -
Eupl07g01683 364 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Eupl07g01683 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Eupl07g01683 364 SMART serkin_6 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01683 364 Gene3D Transferase(Phosphotransferase) domain 1 145 354 - -
Eupl07g01683 364 SUPERFAMILY Protein kinase-like (PK-like) 50 345 IPR011009 -
Eupl07g01683 364 PIRSF ILK 13 353 - -
Eupl07g01683 364 FunFam PTI1-like tyrosine-protein kinase 3 33 143 - -
Eupl07g01683 364 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01683 364 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 5 352 - -
Eupl07g01683 364 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Eupl07g01683 364 FunFam pto-interacting protein 1 145 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01683 Eupl-Chr7 38882269 38891204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01683 50 346 Receptor kinase-like Gene Family AT4G02010 50.166 1.68e-91 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Eupl07g01683 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01683 K13436 - msin:131231597 638.647