Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01682 ATGGCGACTAGAATTGGAAGTGAAGCCCATCACTTCTACGGCCCAGGTGCGCCGGATTTTGTGTTGGAGAAGGAATTGAAGGGTGTTGGGAAGAGGAGTCTGGAATGGGACTTGAATGACTGGAAATGGGACGGTGATCTATTCATCGCTAGCCCTTTGGATTCTGTTCCGTCGGATTGTAGGAGCAGGCAATTGTTTCCTGTTCAGGCAGAAATTCCATTTTCTGGGGGTTTGTCGAACAGTTCATCTTCTTGTTCTGATGAGAGCAATCTGCAGAGTGAGAAAGGAAAAAGGGAATTGGAGAAGCGGAGGAGGGTAATTGTTGTTGAAGATGATGAGCTGAATGATGAAGCGGGGAATCTTACTTTGAATCTTGGCGGGCATGTTTATCCAATAGTGGAAGATGAGGTTGCGAATTGGGACGGGAAGAATGGAAAGAAGACAAAGTTGGGGACTACTTCGAATCGTGCTGCTTGTCAGGTGGAGAATTGTGGGGCTGATCTGAGCAATGCCAAGGACTATCATAGGCGACATAAGGTCTGTGATATGCACTCCAAGGCCAGTAGTGCACTTGTAGGCAATGTTATGCAGCGGTTCTGTCAGCAGTGCAGTAGGTTTCATCTTCTTCAAGAATTTGATGAAGGGAAGAGAAGCTGTCGTAGACGTTTGGCAGGGCATAATAGACGGAGGAGAAAAACACATCCTGATGCGGTTGTTAATGGAAGTTCCTTGAATGATGATCGGACTAGTAGTTATCTATTGATAAGTCTACTAAAAATTCTCTCCAATATGCATTCAAATAACTCAGACCAGACAAAGGATCAGGATCTTCTGTCTCATCTTTTTAGGAGCCTTGCTGGCTTTGCTGGTACATTTGATGGAAGGAACATATCTGGGCTCCTGCAGGAATCTCAAGATTTGATCAATGTTGGGACTTCTGCTGGAACATCTTCAAAAGGAGTGCCAGCCTTGCTCTCAAATGGTTTTGAACCTTCTAGGATTCTGGGCTCAACCTCTAAAATCAATGGCGACTCTGGTGCTCAAGGGCCTCAGATGAGGCCTATAGAACAATATGTTAATGTTGCTGCATCTGCGATGCAACATAACGAAATTATTACAGATAGTGCTCGGGGTGGAGCTCTACAGACTGTATCCCCAAAATCTGCAACCATGTTTCCTGTAAGAGACAGCCTTCCAGCCAAAGCAGCAGCCACGGATTCTATTGGAGGAAGGATCAAGTTAAATAATATTGATTTGAATAATATCTATAATGATTCACAAGATTACATAGAAGACTTAGAGAGGTCACAGGCACCTCTAAATTTGGGGACTGGTTCTCTAGATTGCCCTTCATGGGTTCAGCAGGATTCTCACCAGTCAAGTCCACCTCAGACAAGTGGAAATTCAGATTCAGCATCAGCCCAGTCACCATCTAGTTCCAGTGGAGATGCTCAGAGCCGCACAGATCGAATTGTTTTCAAACTCTTCGGCAAAGATCCAAATGATTTTCCTCTTGTGTTGAGAGCACAGGTCCTTGACTGGTTATCCCACAGTCCTACGGACATCGAGAGCTACATCAGGCCCGGTTGTATCATTCTAACAGTTTACCTTCGGCTGGCGGAGTCCACATGGGAGGAGCTTTGCTGTGATCTAAGCTCCAGTTTGAGTGCACTTCTGGATACCTCCGACGATCCTTTTTGGAGGACAGGATGGGTTTATATTAGGGTGCAGCATCAAATAGCATTTATCTATAATGGTCAGGTTGTCCTAGATACGCCCTTACCTCTAAAAAGTCAAAATCACTGTAGGATCTCAAGCATCACTCCTGTTGCAGTTTCTGTATCTGAGAGAGCTCAGTTTATAGTTAAAGGCTTTAATCTATCTCGGCCCACCACAAGGTTACTCTGCGCACTAGAAGGGAATTATCTGGTCCAGGAACCTAGTCATGACTTGGTGGAGGGCCCCGATACTATCAAGGATGATGATGAGCTCCAGTGCCTCAGCTTCCCTTGCACCGTTCCTGATGTAATTGGGAGAGGATTCATTGAGGTCGAAGACCATGGTATCAGTGGTGGCTTCTTTCCATTCATAGTCGCAGAACAGGATGTGTGTTCCGAGATCCGTACGCTGGAGAGTGCAATAGAGGTAGCTGAGTCTGATGATGCCATCCAGGGAACAACTGGAAAAACGGAAGCCCGGAATCAAGCCCTAGACTACATCCATGAAATGGGTTGGCTTCTTCACAGGAGTCACTTGAGATCTAGATTGGGTCACATGGATCCCAATTCTGATGCATTTCCTTTCACACGGTTCAGGGGGCTCATGGAGTTTTCCATGGACCGTGATTGGTGTGCTGTAGTCAAGAAACTCCTGGACATTCTGTTTGAGGGAACTGTGGGTGCAGGTGAGCATTCTTCTGTTGAGCTTGCATTGTCAGAGATGGGCCTCCTCCACAGAGCTGTGCGGAGCAGCTGTAGGCCGTTGGTGGAGCTACTTTTGAGATATGTCCCAGATAAAGCTTTGAATAAAGCAGGATTGGAACACAAGCAACAGGATAGCTTCTTCTTTAGACCTGATGCTGTTGGTCCTGCGGGTTTGACGCCTCTTCACATTGCAGCCAGTAAAGATGGTTCTGAGATTGTGCTGGATGCATTAACTGATGATCCGGGATCGGTGGGAATGGAAGCATGGAAGAGCGCTCGTGACAACACAGGTTTCACACCTGCAGATTATGCGCGCTTGAGAGGCCACTATTCCTACATCCATTTGGTGCAGAAGAAAATTGACAAGAAATCAGAAGCCGGGCATGTGATCCTCGACATTCCAGACGTTCTCAAAGACAGCAACAGCAACCAGAAGCAAACAAACGGGACCCTGAACTTGGCCAAAGTTACTGGCTTTCAGATTGACAAGACTGAACTGAGAGCAATCCACCGATACTGCAAACGCTGCAATCAGCAAGTTACTTATGGCAATACCAGCAGATCGCCGGCGTACAGGCCTGCAATGCTCTCAATGGTGGCCATTGCCGCAGTCTGTGTCTGCCTCGGCCTTCTCTTCAAAAGCTCACCTGAAGTTCTGTGCGTGTTCCGTCCATTCAGGTGGGAATTGTTGGATTTTGGATCAATGTAA 3132 0.4668 MATRIGSEAHHFYGPGAPDFVLEKELKGVGKRSLEWDLNDWKWDGDLFIASPLDSVPSDCRSRQLFPVQAEIPFSGGLSNSSSSCSDESNLQSEKGKRELEKRRRVIVVEDDELNDEAGNLTLNLGGHVYPIVEDEVANWDGKNGKKTKLGTTSNRAACQVENCGADLSNAKDYHRRHKVCDMHSKASSALVGNVMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNRRRRKTHPDAVVNGSSLNDDRTSSYLLISLLKILSNMHSNNSDQTKDQDLLSHLFRSLAGFAGTFDGRNISGLLQESQDLINVGTSAGTSSKGVPALLSNGFEPSRILGSTSKINGDSGAQGPQMRPIEQYVNVAASAMQHNEIITDSARGGALQTVSPKSATMFPVRDSLPAKAAATDSIGGRIKLNNIDLNNIYNDSQDYIEDLERSQAPLNLGTGSLDCPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSSGDAQSRTDRIVFKLFGKDPNDFPLVLRAQVLDWLSHSPTDIESYIRPGCIILTVYLRLAESTWEELCCDLSSSLSALLDTSDDPFWRTGWVYIRVQHQIAFIYNGQVVLDTPLPLKSQNHCRISSITPVAVSVSERAQFIVKGFNLSRPTTRLLCALEGNYLVQEPSHDLVEGPDTIKDDDELQCLSFPCTVPDVIGRGFIEVEDHGISGGFFPFIVAEQDVCSEIRTLESAIEVAESDDAIQGTTGKTEARNQALDYIHEMGWLLHRSHLRSRLGHMDPNSDAFPFTRFRGLMEFSMDRDWCAVVKKLLDILFEGTVGAGEHSSVELALSEMGLLHRAVRSSCRPLVELLLRYVPDKALNKAGLEHKQQDSFFFRPDAVGPAGLTPLHIAASKDGSEIVLDALTDDPGSVGMEAWKSARDNTGFTPADYARLRGHYSYIHLVQKKIDKKSEAGHVILDIPDVLKDSNSNQKQTNGTLNLAKVTGFQIDKTELRAIHRYCKRCNQQVTYGNTSRSPAYRPAMLSMVAIAAVCVCLGLLFKSSPEVLCVFRPFRWELLDFGSM* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01682 1043 Gene3D - 785 937 IPR036770 -
Eupl07g01682 1043 MobiDBLite consensus disorder prediction 224 243 - -
Eupl07g01682 1043 MobiDBLite consensus disorder prediction 77 97 - -
Eupl07g01682 1043 MobiDBLite consensus disorder prediction 451 486 - -
Eupl07g01682 1043 Gene3D - 151 220 IPR036893 GO:0003677|GO:0005634
Eupl07g01682 1043 ProSiteProfiles Zinc finger SBP-type profile. 156 233 IPR004333 GO:0003677
Eupl07g01682 1043 Pfam SBP domain 159 232 IPR004333 GO:0003677
Eupl07g01682 1043 SUPERFAMILY Ankyrin repeat 814 924 IPR036770 -
Eupl07g01682 1043 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 80 864 IPR044817 GO:0003677
Eupl07g01682 1043 SUPERFAMILY SBT domain 158 238 IPR036893 GO:0003677|GO:0005634
Eupl07g01682 1043 FunFam Squamosa promoter-binding-like protein 14 150 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01682 Eupl-Chr7 38857703 38867166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01682 30 1042 SBP-box Gene Family AT3G60030 52.816 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Eupl07g01682 SBP 1.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01682 - - nnu:104607129 1472.6