Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01679 ATGATAAGGGAATTGCTTCTCATGAGGAGGAATTCTTTCATATATGTTTTCAAATCAACTCAGCTTGTCATTATTGCATCCATCACGATGACTGTTTTTCTTCGAACTCGAATGGATGTTGATGCGGTCCATGCAAATTACTTTTTGGGTTCTCTGTTTTATGCGCTGATCATACTTATGGTCGATGGGTTCCCAGAGTTGTCCATGACTGTTTCAAGAGTTGCTGTTTTCTACAAGCAGAGAGAATTATGCTTTTACCCAGCTTGGGCTTATGCAATTCCAGCCAGTATTCTAAAGGTTCCACTTTCCTTGTTGGAGTCTATAGTTTGGACAACTCTTACTTACTATGTCATTGGGTACAGTCCTGAGTTTGGGAGATTCATCCGCCAGTTCGTTCTACTTTTTGCTGTGCATCTGGTGTCAACATCCATGTTCCGTTTTATTGCCTCGGTCTTCCAGACTGTGGTTGCTTCTACAACAGCTGGCAGTTTGTCATTATTAATTATCTTGTTATTTGGTGGCTTCATCATCCCACAACCCTCCATGCCAGCTTGGTTGCAGTGGGGATTCTGGGTTTCCCCATTGACATATGCAGAGATAGGGATAACCGTAAATGAATTTCTTGCTCCCCGTTGGCAAAAAATGTCGTCAACAAACACATCTATAGGGCGACAAACACTGGAAAGCCGTGGATTAAATTTTGATGGCTACTTTTATTGGCTATCACTCAGTGCCTTATTTGGGTTTTCAGTACTTTTCAACACTGGATTTACCCTGGCCTTGACTTTTTTAAAGCCTCCTGGGATGTCTCGTGCTATTATTTCTCATGAGAAGCTCTCTCAAATACGAGGAGAAGATTGCATTAATGTCCCACGTGTAGAGAAGAAGCCCTTTAGTGCTCCTCCTAAAATTATTGCAGAACCTAAAAAAGGAGGGATGACTTTACCTTTTGAGCCCCTAACAGTGGCATTTCAGGATGTCCAGTACTTCATCGACACCCCTTTGGAAATGAGAGAACGGGGTTTCACACAAAAAAAACTCCAACTTCTTCATGACATTACAGGTTCTTTCATGCCTGGTGTTCTTACAGCATTGATGGGTGTCAGTGGAGCTGGGAAAACAACTCTTTTGGATGTTCTTTCTGGAAGAAAAACCGGTGGTACTATTGAAGGAGATATAAGAATTGGTGGGTATCCTAAAGTCCATGAGACATTTGCTAGGATATCAGGTTACTGTGAGCAGACTGACATACATTCTCCGCAAATTACTGTTGAAGAATCAGTGATATATTCAGCTTGGCTTCGGCTCGCTCCTGAGATTGATTCAAATACTAAAGCTGCATTTGTGGATGAAGTCCTTGAAACCATTGAGCTTGATGGAATTAAAGATGCTTTAGTAGGCATTCCTGGTGTTAGTGGTCTATCAACTGAGCAACGTAAACGGCTCACAATAGCTGTGGAGCTTGTAGCCAACCCGTCTATTATCTTCATGGATGAACCCACATCAGGTTTGGATGCAAGAGCAGCTGCAATTGTCATGCGGGCAGTGAGGAATGTTGTTAATACAGGAAGAACAGTTGTTTGCACTATCCACCAACCAAGTATTGACATATTCGAGGCATTTGATGAGTTAATTCTAATGAAAACTGGAGGACGCGTAATTTACTGTGGACCATTGGGTCAGCATTCAAGTAGGGTTATTGAATATTTTGAGGGTATGTCTGGGGTACCGAGGATTAAAGACAATTACAATCCAGCAACATGGATGTTAGAAGTCACTTCTACATCTGCAGAAGCTGAACTTGGTGTAGATTTTGCCCTTCTTTACAGCGAGTCCACTTTGTACAAGGACAAGAAAGAGCTGGTTAAGCAATTGAGTACTCCACCTCCTGGTTCAAAGGACTTGCATTTCCCCACCCGTTTTTCGCAGAATGGTTGGGGGCAGTTCAAAGCATGTCTCTGGAAACAGCACTTGTCCTATTGGAGATGTCCTGCATATAACTTGATGCGCTTCGTGTTTATGATTGTCTCGTCTTTGATGTTTGGAGTAGTGTTTTGGCAGAAAGGAAAGAAATTAAATAACCAGCAGGACTTGTTCAATGTATTTGGTTGCATGTTCTCTGCCGTGATCTTCTTGGGAATAAATAGCTGCTCATCAGTTTTACCATTTGTTGCAACTGAGCGCAACGTTTTGTACCGGGAAAAATTTGCAGGGATGTACTCTTCACGGGCTTATTCATTTGCACAGGTGGCAGTTGAGCTTCCCTACTTGTTCACCCTAGCACTTCTGTTTTTGATCATCACGTATCCGATGATCGGGTACTTCTGGTCAGCTTATAAGATCTTCTGGTACTTCTATGCCATGTTTTGTACACTAATCTACTTCAACTACCTTGGGATGCTGCTTGTGTCGTTGACACCAAACGTTCAGGTAGCTTCCATATTGAGTTCTGCCTTCTACACCATGCTGAATCTGTTCTCTGGGTTCCTGATACCCAAAACGGTGAAAACTAGAGTGCACATTGTGTAA 2529 0.4239 MIRELLLMRRNSFIYVFKSTQLVIIASITMTVFLRTRMDVDAVHANYFLGSLFYALIILMVDGFPELSMTVSRVAVFYKQRELCFYPAWAYAIPASILKVPLSLLESIVWTTLTYYVIGYSPEFGRFIRQFVLLFAVHLVSTSMFRFIASVFQTVVASTTAGSLSLLIILLFGGFIIPQPSMPAWLQWGFWVSPLTYAEIGITVNEFLAPRWQKMSSTNTSIGRQTLESRGLNFDGYFYWLSLSALFGFSVLFNTGFTLALTFLKPPGMSRAIISHEKLSQIRGEDCINVPRVEKKPFSAPPKIIAEPKKGGMTLPFEPLTVAFQDVQYFIDTPLEMRERGFTQKKLQLLHDITGSFMPGVLTALMGVSGAGKTTLLDVLSGRKTGGTIEGDIRIGGYPKVHETFARISGYCEQTDIHSPQITVEESVIYSAWLRLAPEIDSNTKAAFVDEVLETIELDGIKDALVGIPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNVVNTGRTVVCTIHQPSIDIFEAFDELILMKTGGRVIYCGPLGQHSSRVIEYFEGMSGVPRIKDNYNPATWMLEVTSTSAEAELGVDFALLYSESTLYKDKKELVKQLSTPPPGSKDLHFPTRFSQNGWGQFKACLWKQHLSYWRCPAYNLMRFVFMIVSSLMFGVVFWQKGKKLNNQQDLFNVFGCMFSAVIFLGINSCSSVLPFVATERNVLYREKFAGMYSSRAYSFAQVAVELPYLFTLALLFLIITYPMIGYFWSAYKIFWYFYAMFCTLIYFNYLGMLLVSLTPNVQVASILSSAFYTMLNLFSGFLIPKTVKTRVHIV* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01679 842 Pfam ABC-2 type transporter 531 592 IPR043926 GO:0140359
Eupl07g01679 842 Pfam ABC transporter 350 502 IPR003439 GO:0005524
Eupl07g01679 842 CDD ABCG_PDR_domain2 319 557 IPR034003 -
Eupl07g01679 842 Pfam ABC-2 type transporter 2 207 IPR013525 GO:0016020|GO:0140359
Eupl07g01679 842 Pfam ABC-2 type transporter 648 834 IPR013525 GO:0016020|GO:0140359
Eupl07g01679 842 Gene3D - 334 571 IPR027417 -
Eupl07g01679 842 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 3 834 - -
Eupl07g01679 842 Pfam Plant PDR ABC transporter associated 212 274 IPR013581 -
Eupl07g01679 842 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 322 575 IPR003439 GO:0005524
Eupl07g01679 842 FunFam ABC transporter G family member 34 336 568 - -
Eupl07g01679 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 562 IPR027417 -
Eupl07g01679 842 SMART AAA_5 359 551 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01679 Eupl-Chr7 38828722 38839838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01679 333 534 Calmodulin-binding Proteins AT2G36910 27.313 2.63e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01679 K08711 - nnu:104607125 1325.07