LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl07g01672	ATGAGCGATTTTTCTGTCTTTCCATCCGATTCGACAGAGGGACAAGTAGGGCCGTTCTGGTACCATGAGGACACGGGAGCCTACTTCGACGACTCGGATCACTACAAGATGATCAAAGCAATGTGTAGGCTTTCATGCAGTGTCTGTGACAAGATGGATGATCAAGGAGGTAACGACGGCTCGAAGAGAAAGGGAAAGTTTCGGAACATCGAGCAGTTGAAGAGTCATTTATACCATCGGCATAGGTTGTTAATGTGCAGTTTATGTTTGGAAGGAAGGAAGATATTTATTTGTGAACAGAAACTGTATACCAAAGCACAGTTGAAACAACACATAAACACGGGTGATTCGGAGGTTGATGGCAGTGAGAGTGAAAGAGGTGGCTTCATGGGGCATCCTATGTGTGAGTTCTGTGGAAAACCATTCTATGGGGATAATGAGTTGTACTCACATATGTCTACCGAACACTTTACATGTCACATATGCCAAAGGCAGCATCCAGGACAGTTCGACTACTTTAAAAATTATGATGATTTGGAGATTCATTTCCGTCAAGAGCATTTTCTATGTGAGAATGAGGCCTGCCTTGCCAAAAAGTTCATTGTTTTTCAATCTGAATCTGAAATGAAGAGGCATAATATTATGGAACACGAGGGGAACATGTCTCGTTCTAAGCGCAACTCTGCCCTTCAGATACCAACTAGCTTCCGATATCGGCGAAGTGATGAACAAGATCATCGTCGCGGAAGAGGACGGGGGGGTTTCCGTTCTGATTCTTCTGAGAATCAACTTTCATTGGCCATTCTAGCTAGTTTTGAAACAGCCAGAGTGGATAACTCAATTCATGATCCATCATCGAGTTCACAACTACTTCCTGATCATGGAGAGACGAGTGAAGTTGATGATATTGTGGCCTCCTTTGAATCATTAGCCACCGCAGATTCTGAGCCTTCTTCGAGGTACCGTGAGGCGGTGAGCCAAAGCTCAAGGAATGCATCTCTAGAAGAATCATCCTTTCCTCCGCTACCCATTGCTCCAGGAAACGGTCAACAGAAACTCAAACATGACTCAGAAGGGTTGGGTAAGAACACAATGGCTGCTCGCCTCCGCCGCCGCAACAATGGAACTGTAACCATTCTCAATTCGGCTCGTGCTTGGCCGGCAACAAGTCGTGGACCTGCATCAGCATCTAGTAGTTCTGCCCAGTCTAGGCCTACAACAAATTTTGGACATTTATCATCATCTAGTTCTGCCAGTTCTACCCAGACTAAGCCAGCAGCTACCAATGGGCCCGTACCCTCTAGTTATGCAAATTCTGCTCAGGTCAGACCTTCAATTCATGGACTTGCATCAGCAAGTTCTTCTTCGAGTTCGAGTAGTATCACAAGGGTCACCCACTCTGCATCGGCTCCTAACCTTGTTGAGCGAGGATCTTTAGACTCTTCCCTGTCTAATTTTCCTCCTGTTTCTGCGACACGAAAGAACCAGTTGTCCACAACTGGTCAGCCTTTGCTGAAGGTGGAAGATGTTCAGACTGCAAACAAGTCTTTAGTGGAAAGGATCCGATCTGCTCTAGAGTTTGATGAGAACAAATACAGTGCTTTCAAAGACATATCTGCAGAGTTCCGGCAGGGTGCAATTGACAGTGGAGAATATCTGTACTATGTCCAACAGTTTGGGCTGTCGCATCTTGTTCTTGAGCTAGCTAGACTCTGTCCTGACGCTAAGAAGCAGAGAGAGCTTATCAAGACCTACAATGCCAGTGTGCGGTGTGACAACCCACGAGAAAATGGTCCCAACAGTAGTACTCGCTCAAAAGTGGGCAATGGTTCCAACAAGGGTAAAGGGAAGGGGGTGGATGTAGTAGATGGTAGTTCAAAGGATACATTGGCAGATGGCATTATAAGCACGGTGAGGAAACTGCAGGCTAGTTATAAGCCTTTGGAAGAAGAGGTGGAGGTGTTATTGAAGGATGGGTATCGTGGTTCCAAAGGAAAATCAAAGGTATCAAATGTTGAAGAGCAGTCGGGATTGAGTTCTGCCAATCGGAAGCTAGTCAATTCTAATGGTCAAAATGATTCTCATCCAGCTGGTGGTAGCACCAACCAAAATTCAGGTGTTGGGGGAGGAGGTAAGCAACGAAAGAAGACTTCTAAGTTCCACAGAGTCCGTTTGGGTGATGGCTCGGCGGCAGCACTTCTAGACCATAATTCTGGTCAGCATGAAGAGGAGACGATGAATTTGAACCAGAACCCTTCTGAAGGGTTGCCAGTTCGTGGTGTTTGGCGGAATGGTGGAGGTCAAAGACTTGTGGCCAAGACTTCAAGAGATACTGCAAAATGA	2343	0.4601	MSDFSVFPSDSTEGQVGPFWYHEDTGAYFDDSDHYKMIKAMCRLSCSVCDKMDDQGGNDGSKRKGKFRNIEQLKSHLYHRHRLLMCSLCLEGRKIFICEQKLYTKAQLKQHINTGDSEVDGSESERGGFMGHPMCEFCGKPFYGDNELYSHMSTEHFTCHICQRQHPGQFDYFKNYDDLEIHFRQEHFLCENEACLAKKFIVFQSESEMKRHNIMEHEGNMSRSKRNSALQIPTSFRYRRSDEQDHRRGRGRGGFRSDSSENQLSLAILASFETARVDNSIHDPSSSSQLLPDHGETSEVDDIVASFESLATADSEPSSRYREAVSQSSRNASLEESSFPPLPIAPGNGQQKLKHDSEGLGKNTMAARLRRRNNGTVTILNSARAWPATSRGPASASSSSAQSRPTTNFGHLSSSSSASSTQTKPAATNGPVPSSYANSAQVRPSIHGLASASSSSSSSSITRVTHSASAPNLVERGSLDSSLSNFPPVSATRKNQLSTTGQPLLKVEDVQTANKSLVERIRSALEFDENKYSAFKDISAEFRQGAIDSGEYLYYVQQFGLSHLVLELARLCPDAKKQRELIKTYNASVRCDNPRENGPNSSTRSKVGNGSNKGKGKGVDVVDGSSKDTLADGIISTVRKLQASYKPLEEEVEVLLKDGYRGSKGKSKVSNVEEQSGLSSANRKLVNSNGQNDSHPAGGSTNQNSGVGGGGKQRKKTSKFHRVRLGDGSAAALLDHNSGQHEEETMNLNQNPSEGLPVRGVWRNGGGQRLVAKTSRDTAK*	781

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	314	438	-	-
	Eupl07g01672	780	SMART	c2h2final6	44	81	IPR013087	-
	Eupl07g01672	780	SMART	c2h2final6	188	217	IPR013087	-
	Eupl07g01672	780	SMART	c2h2final6	157	187	IPR013087	-
	Eupl07g01672	780	SMART	c2h2final6	133	156	IPR013087	-
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	590	610	-	-
	Eupl07g01672	780	ProSitePatterns	Zinc finger C2H2 type domain signature.	135	156	IPR013087	-
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	216	259	-	-
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	238	255	-	-
	Eupl07g01672	780	PANTHER	ZINC FINGER PROTEIN 598	2	692	IPR044288	GO:0061630\|GO:0072344
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	391	438	-	-
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	314	336	-	-
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	661	780	-	-
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	369	385	-	-
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	669	711	-	-
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	590	624	-	-
	Eupl07g01672	780	MobiDBLite	consensus disorder prediction	468	498	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl07g01672	1	767	C2H2 Transcription Factor Family	AT3G62240	50.000	0.0	704

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Eupl07g01672		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl07g01672	K22381		-	nnu:104607117	977.622