Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01653 ATGGTAGCAGAAGCAGAGATTGTTTGTCAACAGAGCATCCACGTTTTGGATGTTTCGCGCTCTGAAATAGATGTGAGGTCTCCGGACACCATTTCAGATGGCGCCCTTGAATCTGCTGTTCTCCAATTTGTCCCAAGTATCCGTTCCGGTAGCTTTGCTAACATTGGGCGCCGGATATTAATGGAAGACGAACACATACGGATCGATGATCTATCCTCGCACTTGGGGTCACTCTTCAGATGCCCCACGCCAAGTGCATTTTATGGGGTGTTCGATGGTCATGGAGGACCTGACGCTGCAGCATATATCAGGAATAATGCGATTAGATTCTTTTTTGAAGATGCCGATTTCCCACAAACATCTGAGGCTGCTGATGATGTCTTCTTAGAAGAGGTTGAGAATTCCTTCCGTAAATCATTCCTTCTGGCCGACCTTGCTTTAGCTGATGACGGCACTATTAGCAAGTCTTCTGGGACAACAGCACTTACTGCTCTGATACTTGGAAGACTTCTATTGGTAGCCAATGCTGGTGACTGCCGAGCAGTTCTGTGCCGTAAAGGAGAGGCAATTGAGATGTCTCAAGACCACAAGCCCAAACATGCATCAGAGCGTAGGCGGATTGAGGAGTCGGGCGGGTACATAGATGGTGGGTATCTCAACGGTGAACTCTCAGTTTCCAGGGCCCTGGGGGACTGGGACATGAAGTTACCCCATGGCTCCTCGCCTCTCATTGCTGAACCTGAGTTTCAGCAGGCAATTCTCACAGAAGACGATGAGTTCCTCATCATTGGATGCGATGGGATCTGGGATGTGATGTCGAGCCAGCAAGCAGTTGGTGTTGTTCGCCGCGGACTCCGCAGGCACGACAATCCAGAGCAATGTGCCAGAGACCTTGTCATGGAGGCACTCTGCCGCAAAACCTCAGACAATGTGACTGTGATTGTTGTGTGCCTTTCTACCACAGACCACCAGGAATCATCACCACCTCGGCAGCGGAGATTGAGGTGCTGTAGCCTCTCTGCCGAGGCCCTATGTAACATCCAAAGCTTCCTGGGGGACGATGGTGGGTGTTGA 1074 0.5065 MVAEAEIVCQQSIHVLDVSRSEIDVRSPDTISDGALESAVLQFVPSIRSGSFANIGRRILMEDEHIRIDDLSSHLGSLFRCPTPSAFYGVFDGHGGPDAAAYIRNNAIRFFFEDADFPQTSEAADDVFLEEVENSFRKSFLLADLALADDGTISKSSGTTALTALILGRLLLVANAGDCRAVLCRKGEAIEMSQDHKPKHASERRRIEESGGYIDGGYLNGELSVSRALGDWDMKLPHGSSPLIAEPEFQQAILTEDDEFLIIGCDGIWDVMSSQQAVGVVRRGLRRHDNPEQCARDLVMEALCRKTSDNVTVIVVCLSTTDHQESSPPRQRRLRCCSLSAEALCNIQSFLGDDGGC* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01653 357 PANTHER PROTEIN PHOSPHATASE 2C 51 316 IPR015655 GO:0004722|GO:0006470
Eupl07g01653 357 SMART PP2C_SIG_2 63 318 IPR001932 -
Eupl07g01653 357 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Eupl07g01653 357 SUPERFAMILY PP2C-like 42 319 IPR036457 -
Eupl07g01653 357 Gene3D - 38 326 IPR036457 -
Eupl07g01653 357 FunFam Probable protein phosphatase 2C 22 33 321 - -
Eupl07g01653 357 Pfam Protein phosphatase 2C 50 311 IPR001932 -
Eupl07g01653 357 CDD PP2Cc 47 318 IPR001932 -
Eupl07g01653 357 ProSiteProfiles PPM-type phosphatase domain profile. 48 318 IPR001932 -
Eupl07g01653 357 SMART PP2C_4 38 316 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01653 Eupl-Chr7 38550085 38552656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01653 61 351 PP2C-type Phosphatase Gene Family AT3G62260 67.918 1.19e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01653 K14803 - ming:122058432 518.079