Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01645 ATGCCGTTGGCGAAGTATAACTGCGACTACTGCGACAAACAATTCCAAGATACGCCGTCTGCTAGAAAGCGCCACCTCCAGGGCGTACAGCATCAGCGAGCCAAAGCCCTCTGGTACGACTCCTTGAAAGATCCAAATCAGATTCAAGCAGAGAGCTTTGGAAAAGGAGTCTGCAACCATTTCGTGCGGACGGGATTCTGTCAGTATGGGGATTCCTGTAAATATTTTCATCCCAAGCAAAATATTCAAAACCCGAATACTCAAAGCATACTAGTACCAAACTTCGCAGAGACCGTCCAGTCGCCAAATAGTCTGGGGAATCAACTTATAGGAGGAGGTGTCTCTTTGCCAGGGGATATGATTAGAGATGGCAAGGGAATTTCATTGGGTAATTTACCTCCATCGTTGAGGCCACCTCCAGAAGGTGGATATCCCCCTTTTCCCTTTGTGGACTGGGGATAG 462 0.4784 MPLAKYNCDYCDKQFQDTPSARKRHLQGVQHQRAKALWYDSLKDPNQIQAESFGKGVCNHFVRTGFCQYGDSCKYFHPKQNIQNPNTQSILVPNFAETVQSPNSLGNQLIGGGVSLPGDMIRDGKGISLGNLPPSLRPPPEGGYPPFPFVDWG* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01645 153 SMART c3hfinal6 52 79 IPR000571 GO:0046872
Eupl07g01645 153 PANTHER NUCLEASE-RELATED 1 153 - -
Eupl07g01645 153 Gene3D Classic Zinc Finger 3 51 - -
Eupl07g01645 153 Gene3D - 52 104 - -
Eupl07g01645 153 Pfam U1 zinc finger 5 38 IPR013085 GO:0008270
Eupl07g01645 153 SUPERFAMILY beta-beta-alpha zinc fingers 4 61 IPR036236 -
Eupl07g01645 153 MobiDBLite consensus disorder prediction 127 153 - -
Eupl07g01645 153 SUPERFAMILY CCCH zinc finger 55 81 IPR036855 GO:0046872
Eupl07g01645 153 ProSiteProfiles Zinc finger C3H1-type profile. 52 80 IPR000571 GO:0046872
Eupl07g01645 153 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 56 79 IPR000571 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01645 31 80 C2H2 Transcription Factor Family AT5G18550 44.000 5.37e-08 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl07g01645 zf-U1 1.2e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01645 K13152 - nnu:104611238 236.498