Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01615 ATGGCTACCCATACCCATACCCATATCCACCTTCTTCTCTGCTTTCTCTCTCTATTATTCACTCTTCCTTTACAGTCCCTTTCATGGAGTCCAGAGAGAGAAAGTGATTACCAGAAATGGGTGTCATGGAACGTCGAAAACTACCGGAAAAAGACTAGTTTTGGAACAGAAGCCATAACCCCCGGCAGGAAAGTAGTGGACGTGAGGCTGAGGAGGGCTGAGTTGAATAAAGTGAGATTGAGTGTTAGTCAAGATGGGGTTGGTGGTTTTAAAACTATCAAAGAAGCTCTTGATTCTATCCCATTAAACAACACAAGGAGAGTTATTTTGGAGATTAAACCAGGTGTTTATAGGGAGAAAATTGTGATCCCTAGGTCTTTGCCTTTTATTACATTTTTAGGGGATTTCGAAAACCCGCCAACCATAACGGGGAACGATACCGGGTCTGTAATGGGAAAAGATGGTACGCCGCTAAAGACGTTCCAAAGCGCAACGGTTGCCGTCAACGCCAATTATTTTGTTGCCATAAACATAAGATTTGAGAACACAGCTCCACACGAAATTGGATCAGTTGGAGAACAAGCTGTGGCCCTTCGCATATCCGGGAACAAAGCAGCATTCTACAATTGCAGTTTTTATGGAAATCAGGACACACTGTATGATCACAAAGGCCTTCACTACTTCAACAATTGCTTCATCCAAGGCTCTGTCGACTTCATATTTGGTTATGGGAGATCCTTATACGAGAATTGCTATTTGAACTCCATAGCAAAGAAGGTGGCATCTCTCACTGCACAAAAGAGGACCAATGCATCCTTGTCTAGTGGATTTTCCTTCAAAGATAGTGTGGTCACAGGAAGTGGTACGGCGTACCTAGGAAGAGCATGGGGTGATCAATCCAGGGTTGTCTTCTCCTACACTTTCATGGACAAACTAGTTTTACCTCAAGGATGGAACAATTGGGGTGATCAAAAGCGCCAAACGAGTGTGTTTTACGGAGAATACAAATGCAGCGGGCCGGGGGCTAACTTAACAGGACGAGTGCCTTGGGCACGAATGCTGACCGACAAAGAGGCGAAGCCCTTCATCGGGACATATTATGTAGATGGAGATACTTGGCTCTTCACGCCCTAA 1134 0.4471 MATHTHTHIHLLLCFLSLLFTLPLQSLSWSPERESDYQKWVSWNVENYRKKTSFGTEAITPGRKVVDVRLRRAELNKVRLSVSQDGVGGFKTIKEALDSIPLNNTRRVILEIKPGVYREKIVIPRSLPFITFLGDFENPPTITGNDTGSVMGKDGTPLKTFQSATVAVNANYFVAINIRFENTAPHEIGSVGEQAVALRISGNKAAFYNCSFYGNQDTLYDHKGLHYFNNCFIQGSVDFIFGYGRSLYENCYLNSIAKKVASLTAQKRTNASLSSGFSFKDSVVTGSGTAYLGRAWGDQSRVVFSYTFMDKLVLPQGWNNWGDQKRQTSVFYGEYKCSGPGANLTGRVPWARMLTDKEAKPFIGTYYVDGDTWLFTP* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01615 377 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 71 374 - -
Eupl07g01615 377 Gene3D - 76 376 IPR012334 -
Eupl07g01615 377 FunFam Pectinesterase 76 376 - -
Eupl07g01615 377 SUPERFAMILY Pectin lyase-like 79 374 IPR011050 -
Eupl07g01615 377 ProSitePatterns Pectinesterase signature 2. 233 242 IPR033131 -
Eupl07g01615 377 Pfam Pectinesterase 81 371 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01615 Eupl-Chr7 37939673 37943161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01615 80 374 Carbohydrate Esterase AT5G47500 47.138 8.47e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01615 K01051 - nnu:104611220 581.637