Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01607 ATGGGGGAGGCATATTTTAGCAAGGGAATGGAGGTTGAGGTTAGCAGCGACGACGACGGCTTCAGGGGTGCATGGTACATCGCAACAGTCCTCCGAACGGTTTCGAAAAAAAACAAGCTCTTTATCGAGTACCAGAGCTTAATGGCCGACGAAAAGGGATCGAAGCCGTTGAGAGAGTTCGTCGATGTGGTCCACGTAAGGCCTAGACCGCCTCGAGAGACCTATCGGAGCTTCAAACTGAGCGAAGAGGTTGACGCATGTCATAACGATGGGTGGTGGGAAGGAGTGGTAACCAACGTTCTTGAGAACTCCAGGTATTCGGTGTACTTCAGGGGCACAAAGGAGCAGATCGAGTTCGGTCAGGCGGATCTTCGGCTTCATCGGGAATGGGTCGACGGGTCATGGGTTCCGCCCTTGGAGGAGGAGCAGAGTAAGTCACCTAAGTCAGAAATTGATCAGAACAAAAAGTCATCTAAATCAAAATTGAAGTTTAGAAAGGGGACACTGGTAGAGGTCAGCAGTGATGAAGAAGGTTTCAGCGGTGCTTGGTTTGCTGCGAAAATTGTCAAAACAATTGGGCAGAACAAGTTCCTGGTGGAGTACCAAAACCTGAAGACAGATGATGAGACAGAGCTTTTGAGAGAAGAGGTGGATGATCTGCACATCAGGCCTTCCCCTCCTGACACTCCGCAGGTTGACCATTTCAGTCTGCTTGAAGAAGTTGATGCTCTATACAATGATGGGTGGTGGGTGGGTGTGATTTCCAAAGTTCTTACTGGCCCAAGGTACGCAGTCTACTTCAAGCAGACCAAAGAGGAATTGGAGTTTGGGCATTCTGAGTTGAGGCTTCATCAGGACTGGATCGATGGCAGATGGGTCAGGGCTTCCCAGGCGTTGAAGTTGTGA 906 0.4989 MGEAYFSKGMEVEVSSDDDGFRGAWYIATVLRTVSKKNKLFIEYQSLMADEKGSKPLREFVDVVHVRPRPPRETYRSFKLSEEVDACHNDGWWEGVVTNVLENSRYSVYFRGTKEQIEFGQADLRLHREWVDGSWVPPLEEEQSKSPKSEIDQNKKSSKSKLKFRKGTLVEVSSDEEGFSGAWFAAKIVKTIGQNKFLVEYQNLKTDDETELLREEVDDLHIRPSPPDTPQVDHFSLLEEVDALYNDGWWVGVISKVLTGPRYAVYFKQTKEELEFGHSELRLHQDWIDGRWVRASQALKL* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01607 301 MobiDBLite consensus disorder prediction 138 157 - -
Eupl07g01607 301 CDD Tudor_Agenet_AtDUF_rpt1_3 6 71 - -
Eupl07g01607 301 CDD Tudor_Agenet_AtDUF_rpt1_3 164 227 - -
Eupl07g01607 301 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 153 - -
Eupl07g01607 301 Gene3D - 153 235 - -
Eupl07g01607 301 Gene3D - 2 79 - -
Eupl07g01607 301 CDD Tudor_Agenet_AtDUF_rpt2_4 80 126 - -
Eupl07g01607 301 MobiDBLite consensus disorder prediction 143 157 - -
Eupl07g01607 301 CDD Tudor_Agenet_AtDUF_rpt2_4 237 283 - -
Eupl07g01607 301 Pfam Agenet domain 9 71 IPR008395 -
Eupl07g01607 301 Pfam Agenet domain 167 227 IPR008395 -
Eupl07g01607 301 Pfam Agenet domain 82 139 IPR008395 -
Eupl07g01607 301 SMART agenet_At_2 4 74 IPR014002 -
Eupl07g01607 301 SMART agenet_At_2 233 289 IPR014002 -
Eupl07g01607 301 SMART agenet_At_2 76 132 IPR014002 -
Eupl07g01607 301 SMART agenet_At_2 162 230 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01607 Eupl-Chr7 37855471 37862847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01607 174 287 PHD Transcription Factor Family AT5G58610 27.941 5.58e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01607 - - mof:131154110 407.912