Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01572 ATGCGGTTTCTTCAATTGTTGATCTTCATTTATATGGCCATGTTTTCAAGTTTAGGAGGATGGAAATTAAGCAATGCAACTGCACCTCCTATTTTCAAGAAAATAACTGTTACACCGTCGGGCCAAGGAGATTTCAGGACTATTGGTGAGGCCATTCAACAAGGAGTCCCTCAAAACAATACTCAGTGGATTCATATTCACGTCTTTATTAAACTTCTGATCCGATGTTTTTATGCATATAGCGAGAAAATTACGATCCCACGGAACAAGCCATACATCGTCTTGGAAGGTGATAGCAGGATGAGAACAGTGATTGAATATAGTTGTAACTCCAATATACAGGATGCTACTATCACTATATGGGCAGACAATTTTTTGGCAAAACGCATTACTTTCAAGAATACGTTTAATCACGATGTTCCAAATGTTAACCCGCGAATGCCTGCAGTAGCTGCTTTTATACAAGGAGACAAAAATTCATTCTACAATTGTGCTTTCGTTGGCCAGCAAGATACACTGTTTGATGCAGTTGGCCGCCATTACTTCCGTTCCAGTTACATTGAAGGTGCAGTCGACTTCATCATGGGCAATGGGCAGTCCGTTTACGAGGACTGCGCCATCAATGTTACTGCCGGGCCGTTATTAGCCGGTTTAGGAGGTTATATAACAGCTCAACATAGAGACAGAACGGACGAACCGACGGGATTTGTGTTTAAATTCTGCAATGTGGTTGGGACCGGTCCAACCTTTCTTGGTAGAGCTTGGGGACCTTCTTCAAGAGTTTTATTTTACAAGACACATTATGCAGTCACAGTGACTCCGGAGGGATGGGATGCTTGGACCTACAAGGGCCATGAGAGCGATTTATATTATGCAGAAGTGGGTTGCAGTGGACCGGGTTCGGACACTTCGAAACGTGTAGTTTGGGAAAAGAAACCCAATGTAGCTGAGTTGGAACATCTTATAGGCAGATCGTTCAACGACGCGGACGGTGCAGCTGGAGCCGATGAGTGTAAAAACGAGTTGGTGAATCTAAAGTAG 1041 0.4352 MRFLQLLIFIYMAMFSSLGGWKLSNATAPPIFKKITVTPSGQGDFRTIGEAIQQGVPQNNTQWIHIHVFIKLLIRCFYAYSEKITIPRNKPYIVLEGDSRMRTVIEYSCNSNIQDATITIWADNFLAKRITFKNTFNHDVPNVNPRMPAVAAFIQGDKNSFYNCAFVGQQDTLFDAVGRHYFRSSYIEGAVDFIMGNGQSVYEDCAINVTAGPLLAGLGGYITAQHRDRTDEPTGFVFKFCNVVGTGPTFLGRAWGPSSRVLFYKTHYAVTVTPEGWDAWTYKGHESDLYYAEVGCSGPGSDTSKRVVWEKKPNVAELEHLIGRSFNDADGAAGADECKNELVNLK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01572 346 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 331 - -
Eupl07g01572 346 Pfam Pectinesterase 35 311 IPR000070 GO:0030599|GO:0042545
Eupl07g01572 346 FunFam Pectinesterase 31 335 - -
Eupl07g01572 346 Gene3D - 30 338 IPR012334 -
Eupl07g01572 346 SUPERFAMILY Pectin lyase-like 34 327 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01572 Eupl-Chr7 37439391 37452067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01572 29 326 Carbohydrate Esterase AT5G47500 36.129 1.73e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01572 - - ming:122071010 356.681