Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl07g01569 | ATGGCTTCATCAAGAGGCAAAGCAGCCAATGTCCAACAAACCCACTCCTCAGGCGCAAGCAACATCAGAGCCCACCAAGCAGACTCTATGAGTAAAGCCATTGCTCAGTACACCGTCGACGCCCGTCTCCACGCAGCCTTCGAACAGTCTGGCGAGTCCGGTAAGTCCTTCAACTACTCCGAATCCATTAAAACCACCACACAATCGGTCCCTGAACAACAAATCACAGCTTACTTGTCGAAAATTCAACGTGGCGGCTACATCCAGCCCTTCGGATGTATGCTTGCTGTCCACGAAACCACCTTCCGAGTCATCGCACACAGCGAAAACGCCACAGAAATGCTAGACCTCACCCCACAATCTGTACCCACTCTCGAAAGACCGGAGACCCTCACAGTCGGTACTGACGTTCGGACACTTTTCACCCCTTCGACCACAATTCTGATCGAAAAGGCCTTCGGTGCTCGTGAAATTACATTATTGAACCCTCTTTGGATCCATTCGAAGAATTCTGGAAAACCATTTTATGCGATCTTGCATAGAATTGACGTGGGAATTGTAATTGATTTAGAGCCGGCAAAGACAGAGGACCCCGCCTTGTCAATTGCTGGAGCGGTGCAATCACAGAAGCTCGCTGTCCGTGCAATTTCACGGTTGCAATCACTCCCTGGTGGGGATATTAAGCTTTTGTGTGATATGGTGGTTGAGCATGTCCGGGAGCTTACCAGGTATGACCGGGTTATGGTGTATAAGTTCCATGAGGATGAGCATGGTGAGGTTGTGGCTGAGAGCAAGCGTTCCGACTTGGAACCGTATATCGGACTACATTATCCTGCCACTGATATACCCCAGGCCTCAAGATTCTTGTTCAAGCAGAATCGGGTTAGGATGATAGTCGATTGCAATGCCACACCCGTTCAGGTAATTCAGGAAGAAGATCTTATGCAGCCTCTATGCTTAGTTGGTTCAACTCTCCGTGCCCCACATGGGTGCCACGCCCAGTACATGGCTAACATGGGCTCAATTGCCTCATTAGCAATGGCAGTGATCATCAATGGGAATGAGGAGGAGGGTACCAGTGGGCGTAACTCGATGAGGCTATGGGGCCTTGTTGTCTGCCACCACACATCATCACGATGCATCCCGTTCCCCCTCCGTTATGCTTGCGAGTTCCTTATGCAGGCCTTTGGGCTTCAATTGAACATGGAATTGCAACTGGCATCCCAATTGTCAGAGAAACACGTTCTACGGACCCAGACTCTCCTGTGTGACATGCTCCTTCGGGACTCCCCGACTGGGATTGTCAGTCAGAGTCCTAGTATTATGGACCTCGTGAAGTGCGATGGGGCTGCACTCTACTACCAAGGGAAATACAACCCAATCGGTGTCACCCCGACTGAAGCCCAGATAAAGGATATTGTGGACTGGTTGTTGGTTTACCATGGGGATTCAACAGGGTTGAGTACAGACACCTTGGCTGATGCCGGGTACCCTGGGGCGGCCTCGCTTGGTGATGCAGTTTGCGGGATGGCTGTGGCTTATATCACCTCAAGGGACTTCTTGTTCTGGTTCCGATCCCATACGGCGAAAGAGATGAAGTGGGGAGGGGCGAAGCATCACCCCAAAGACAAGGATGATGGGCAGAGGATGCATCCACGTTCTTCGTTTAAGGCATTCTTGGAAGTGGTTAAGAGCCGGAGCTTGCCGTGGGAGAATGCAGAGATGGATGCAATCCACTCATTGCAGCTTATACTGCGAGACTCCTTTAGGGATGCTGAAGGTAGAAACTCTAAGGCTGTGATCAATGCCCAGCTTGGGGATTTGGAGTTGCAAGGGATTAACGAGCTTAGCTCTGTTGCGCGAGAGATGGTTAGGCTGATAGAGACTGCAACAGTTCCCATTTTTGCTGTAGATTCTGATGGCCGCATAAATGGGTGGAATGCAAAGGTTGCAGAGTTGACAGGGCTCTCCGTTGAGGAAGCTATGGGAAAGTCGCTAGTTCATGACCTTGTTTATAAGGAATCTGCGGAGGTTGCTGACAAGCTTCTTTACCGTGCTTTAAGAGGTGAAGAAGATAAGAATGTAGAGATAAAGCTGAGGACATTTGGTCCACAACAACTTAACAAAGCTATCTTTGTGGTGGTCAATGCCTGCTTTAGCAAAGATTTCATGAACAACATTGTGGGTGTGTGCTTTGTGGGTCAGGATGTTACTGATCAGAAAGTGGTAATGGACAAGTTCACCCGCATTCAAGGTGATTACAAGGCTATTGTCCAGAATCCCAACCCTTTGATCCCACCCATATTTGCTTCGGATGAGAATACCTATTGCTTGGAGTGGAATACGGCTGTGGAAAAACTCACTGGGTGGGCTAGAGAGGACATCCTTGGGAAGATGTTGGTGGGCGAGGTTTTTGGCAGCTGCTGTCGGCTCAAGGGTGCTGATGCTCTGACAAAATTCATGATTGTCCTGCACAATGCGATAGGGGGGCAGGATACTGACAAATTCCCATTTGCATTCTTTAACCGGAATGGAAAATATGTGGAAGTTCTTTTGACAGCTTATAAAAGGGTTAATATGGATGGGCAGATTATTGGGGCCTTCTGTTTCTTGCAGATTGCAAGCCCTGAATTGCAGCAATCACTGGAAGTCCAGAGGCAGCAAGAGAAGAAATGCTTTGCTAGGGTGAAGGAGTTGGCCTACATTTGCCAGGAGATAAAGAATCCTCTAAGTGGAATACAGTTTACTAACTCACTATTGCAGGCTATGGACTTAACAGATGATCAGAAGCAGTTCCTTGAGACTAGTGCGGCTTGTGAGAGGCAGATGATGAAGATTATAAGGGATGTCAATCTGGAGAGCATTGAAGATGGGTCCTTGGAGCTTGACAAGGCTGAATTTTTACTGGGGAGTGTTATAAATGCTGTTGTTAGCCAAGTAATGATCTTACTGAGGGAAAGAGGTTTACATTTGATCCGCGATATTCCAGAGGAAATCAAAACACTGACTATTTATGGTGATCAAGTAAGAATTCAACAAATTTTGGCCGATTTCTTGTTGAATATGGTGCGATATGCTCCATCTCCAGAAGGTTGGGTAGAGATTCAAGTTCAGCCAACTTTGAAGCAAATTTCGAATGGAATAGAACTTGTGCATCTCGAATTCAGGATGGTATGCCCCGGGGAGGGCCTTCCCCCAGAACTTGTTCAAGATATGTTCCATAGCAGCCGCTGGGTGACTCAAGAAGGTCTAGGGTTGAGCATGTGCAGGAAGATTCTAAAGCTGATGAATGGCGAAGTCCAATATATTAGGGAGTCTGAAAGATGCTATTTCCTCATCATCCTTGAACTTCCCATGCCTCAAAAGAGCTCAGAGACTGTGAATTAG | 3387 | 0.4783 | MASSRGKAANVQQTHSSGASNIRAHQADSMSKAIAQYTVDARLHAAFEQSGESGKSFNYSESIKTTTQSVPEQQITAYLSKIQRGGYIQPFGCMLAVHETTFRVIAHSENATEMLDLTPQSVPTLERPETLTVGTDVRTLFTPSTTILIEKAFGAREITLLNPLWIHSKNSGKPFYAILHRIDVGIVIDLEPAKTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDMVVEHVRELTRYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPVQVIQEEDLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEGTSGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVSQSPSIMDLVKCDGAALYYQGKYNPIGVTPTEAQIKDIVDWLLVYHGDSTGLSTDTLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEMKWGGAKHHPKDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEGRNSKAVINAQLGDLELQGINELSSVAREMVRLIETATVPIFAVDSDGRINGWNAKVAELTGLSVEEAMGKSLVHDLVYKESAEVADKLLYRALRGEEDKNVEIKLRTFGPQQLNKAIFVVVNACFSKDFMNNIVGVCFVGQDVTDQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFASDENTYCLEWNTAVEKLTGWAREDILGKMLVGEVFGSCCRLKGADALTKFMIVLHNAIGGQDTDKFPFAFFNRNGKYVEVLLTAYKRVNMDGQIIGAFCFLQIASPELQQSLEVQRQQEKKCFARVKELAYICQEIKNPLSGIQFTNSLLQAMDLTDDQKQFLETSAACERQMMKIIRDVNLESIEDGSLELDKAEFLLGSVINAVVSQVMILLRERGLHLIRDIPEEIKTLTIYGDQVRIQQILADFLLNMVRYAPSPEGWVEIQVQPTLKQISNGIELVHLEFRMVCPGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIILELPMPQKSSETVN* | 1129 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl07g01569 | 1128 | Gene3D | - | 957 | 1124 | IPR036890 | - | |
Eupl07g01569 | 1128 | Gene3D | - | 875 | 956 | - | - | |
Eupl07g01569 | 1128 | ProSiteProfiles | PAS repeat profile. | 753 | 805 | IPR000014 | - | |
Eupl07g01569 | 1128 | Gene3D | PAS domain | 614 | 750 | - | - | |
Eupl07g01569 | 1128 | CDD | HATPase_Phy-like | 1005 | 1117 | IPR044767 | - | |
Eupl07g01569 | 1128 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 1006 | 1112 | IPR003594 | - | |
Eupl07g01569 | 1128 | Pfam | GAF domain | 226 | 404 | IPR003018 | GO:0005515 | |
Eupl07g01569 | 1128 | FunFam | Phytochrome | 615 | 747 | - | - | |
Eupl07g01569 | 1128 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 969 | 1118 | IPR036890 | - | |
Eupl07g01569 | 1128 | SMART | pas_2 | 621 | 688 | IPR000014 | - | |
Eupl07g01569 | 1128 | SMART | pas_2 | 752 | 822 | IPR000014 | - | |
Eupl07g01569 | 1128 | Pfam | PAS fold | 622 | 737 | IPR013767 | GO:0006355 | |
Eupl07g01569 | 1128 | Pfam | PAS fold | 753 | 872 | IPR013767 | GO:0006355 | |
Eupl07g01569 | 1128 | CDD | PAS | 630 | 701 | IPR000014 | - | |
Eupl07g01569 | 1128 | Gene3D | PAS domain | 766 | 874 | - | - | |
Eupl07g01569 | 1128 | FunFam | Phytochrome | 409 | 539 | - | - | |
Eupl07g01569 | 1128 | Gene3D | - | 207 | 565 | IPR029016 | - | |
Eupl07g01569 | 1128 | ProSiteProfiles | PAS repeat profile. | 619 | 690 | IPR000014 | - | |
Eupl07g01569 | 1128 | SUPERFAMILY | GAF domain-like | 412 | 589 | - | - | |
Eupl07g01569 | 1128 | FunFam | Phytochrome | 957 | 1123 | - | - | |
Eupl07g01569 | 1128 | ProSitePatterns | Phytochrome chromophore attachment site signature. | 326 | 335 | IPR013516 | - | |
Eupl07g01569 | 1128 | SMART | HKATPase_4 | 1006 | 1121 | IPR003594 | - | |
Eupl07g01569 | 1128 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 624 | 732 | IPR035965 | - | |
Eupl07g01569 | 1128 | SUPERFAMILY | GAF domain-like | 206 | 401 | - | - | |
Eupl07g01569 | 1128 | ProSiteProfiles | Phytochrome chromophore attachment site domain profile. | 226 | 394 | IPR016132 | - | |
Eupl07g01569 | 1128 | FunFam | Phytochrome | 875 | 956 | - | - | |
Eupl07g01569 | 1128 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 885 | 950 | IPR036097 | GO:0000155|GO:0007165 | |
Eupl07g01569 | 1128 | CDD | PAS | 764 | 872 | IPR000014 | - | |
Eupl07g01569 | 1128 | Gene3D | PAS domain | 81 | 329 | - | - | |
Eupl07g01569 | 1128 | Pfam | Phytochrome region | 417 | 590 | IPR013515 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | SMART | HisKA_10 | 894 | 958 | IPR003661 | GO:0000155|GO:0007165 | |
Eupl07g01569 | 1128 | PANTHER | OS08G0260000 PROTEIN | 72 | 956 | - | - | |
Eupl07g01569 | 1128 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 767 | 870 | IPR035965 | - | |
Eupl07g01569 | 1128 | PIRSF | Phytochrome_conventional | 8 | 1126 | IPR012129 | GO:0006355|GO:0009585|GO:0009881|GO:0017006|GO:0042803 | |
Eupl07g01569 | 1128 | Pfam | His Kinase A (phospho-acceptor) domain | 897 | 958 | IPR003661 | GO:0000155|GO:0007165 | |
Eupl07g01569 | 1128 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 82 | 196 | IPR035965 | - | |
Eupl07g01569 | 1128 | FunFam | Phytochrome | 766 | 874 | - | - | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 434 | 454 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 735 | 755 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 326 | 347 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 241 | 260 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 519 | 538 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 641 | 656 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 552 | 570 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 622 | 638 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 715 | 732 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | PRINTS | Phytochrome signature | 141 | 163 | IPR001294 | GO:0006355|GO:0009584 | |
Eupl07g01569 | 1128 | Gene3D | - | 409 | 582 | IPR043150 | - | |
Eupl07g01569 | 1128 | Pfam | PAS fold | 77 | 193 | IPR013654 | GO:0006355 | |
Eupl07g01569 | 1128 | CDD | HisKA | 894 | 950 | IPR003661 | GO:0000155|GO:0007165 | |
Eupl07g01569 | 1128 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Eupl07g01569 | 1128 | NCBIfam | PAS domain S-box protein | 626 | 741 | IPR000014 | - | |
Eupl07g01569 | 1128 | SMART | gaf_1 | 226 | 414 | IPR003018 | GO:0005515 | |
Eupl07g01569 | 1128 | ProSiteProfiles | Histidine kinase domain profile. | 901 | 1121 | IPR005467 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl07g01569 | Eupl-Chr7 | 37390206 | 37407722 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl07g01569 | 3 | 1120 | Histidine Kinase Gene Family | AT4G16250 | 73.345 | 0.0 | 1741 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl07g01569 | K12121 | - | ming:122091358 | 2010.34 |