Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01562 ATGATGTGGAGTCAGGCTCATCGTCATCGTCGCCTCCTCTTCTTCTTCCTCACCATTATCTTCATTACTGTCAGTGGCAAATCCGTAAACTCCTCCATTACGGGGTGCGCTCCTTTCAACTGCGCGAGTGGCGACCATTTCAAATACCCTTTTTGGCAGGTTGGATCTTCCAACTATTGTGGATACCCTGGTCTCAGCCTCGATTGCGATGATGAAAGACCTCGCCTCTTCCTCTCCGGTAGAGATTACGTCGTCAAGAACATCAATTATTCAGAAAGTAGCATCACCCTCGTCGACACCAATGTTTGGCACAATTATAGCTGTCCTTGGCCCAGTAGCGAAGTTTCTTTGGAAAGCACGGCCTCGTTAGTTGTTGCCCAAGAACCAAACATCTTCGTAAGGTTCTTCAGAAATTGCTCTCGGATCCCAGCTTCCTTGGATAATATTAGGTGTCCAGGAGAAAGTAATGATACCCTAAGTTCCTATATGCCTGAAGTAAGAGATCTTTTCGCCGCAAATCACCCAGTCTTAGAGTGTGAGAGTGACGTAATGATTCCCATGCTCTATACAGCGTTTCAGAGACTGAAGGGAAGCGGATGGAAGAAGGCTTTGCAAGAGGGATTTAAGTTGCATTGGCGTCCGGACGCTGCCTGCAAGTACTGCGAGTGGTCGGGCGGGATTTGTATGTATCAAAATGATGAAACCGGCTTGAATTTCTCTTGCACTTGTCCGGACAGAAAAGATCACCCTCGAGACTGTAACGACGGCGACGGCCCAGGCTCCACAAAAAAGAAGGCTCTAATAGGTGCATCAATTATAGTGGCAGCAATAGTTATAATCCTACTCTTTGTGTGGAGAAAGAAATTATATTCCTACACCCCGACCTCTTTATGGAAGATCAAAACAAACAGCCAAAATGTAGAGACATTTTTAGAGAACTACAGATCCCTATCTCCAAAAAGGTATCGGTATTCAGATATCAAGAAAATGACTGACTGCTTCAAAGATAAACTAGGTCAAGGTGGCTATGGTGGCGTGTTTAGAGGGAAGCTCCAAGACGGCCGTCTGGTAGCCGTTAAGATCTTGAGTGGAAAAAAAGGTGACGGAGAAGAATTCATTAACGAGGTTGCCACTATCAGTAGGACAAACCATCTTAATATCGTTAGTCTCTTGGGATTTTGCTCTCAGGGATCAAAGCGAGCTCTTGTTTATGAGTTTATGCCCAACGGATCTCTCGAAAAGTTCATCTTCAGCAAGCAACCGAGCCCAACTCATCCTCTGGGATGGGAAAAGCTTTACCAAATTGCCCTTGGTATCGCCAAGGGACTCGAGTACTTGCACCGTGGTTGTAGCACACGGATTTTACATTTGGACATAAAACCTCACAACATTCTCCTAGACCATGACTTCTGTCCGAAGATCTCTGACTTTGGGTTGGCTAAACTCTGTCCAACAAGAGAGAGTGTTATATCAATGCTTGGGACCCGAGGGACCATAGGTTATATTGCACCTGAAGTATATTGTAGAAATTTCGGAGGAGTCTCCTACAAGTCGGATGTCTATAGCTATGGGATGATGGTGTTAGAAATGGTAGGTGGAAGGAAGAACATTGATGTTGAAGTGGAGAAAACAAGCGAAATATATTTTCCGCAATGGATATATAATCGTATCGAGCAACAAGGTGACATTGGATTACGAACATTTGAAGAAGATTTCGAGGAAGAAATAGCAAAGAAGATGGTCTTGGTGGGTTTGTGGTGCATACAGACAGATCCAGTTGTTCGGCCTTCGATGAACAAAGTGGTGGAGATGCTGGAGGGCAGTGTGCAAATGCCACCTAAGCCTTTCTTTGACCACCCTGCAAGATCAGAAGGTTGA 1878 0.4505 MMWSQAHRHRRLLFFFLTIIFITVSGKSVNSSITGCAPFNCASGDHFKYPFWQVGSSNYCGYPGLSLDCDDERPRLFLSGRDYVVKNINYSESSITLVDTNVWHNYSCPWPSSEVSLESTASLVVAQEPNIFVRFFRNCSRIPASLDNIRCPGESNDTLSSYMPEVRDLFAANHPVLECESDVMIPMLYTAFQRLKGSGWKKALQEGFKLHWRPDAACKYCEWSGGICMYQNDETGLNFSCTCPDRKDHPRDCNDGDGPGSTKKKALIGASIIVAAIVIILLFVWRKKLYSYTPTSLWKIKTNSQNVETFLENYRSLSPKRYRYSDIKKMTDCFKDKLGQGGYGGVFRGKLQDGRLVAVKILSGKKGDGEEFINEVATISRTNHLNIVSLLGFCSQGSKRALVYEFMPNGSLEKFIFSKQPSPTHPLGWEKLYQIALGIAKGLEYLHRGCSTRILHLDIKPHNILLDHDFCPKISDFGLAKLCPTRESVISMLGTRGTIGYIAPEVYCRNFGGVSYKSDVYSYGMMVLEMVGGRKNIDVEVEKTSEIYFPQWIYNRIEQQGDIGLRTFEEDFEEEIAKKMVLVGLWCIQTDPVVRPSMNKVVEMLEGSVQMPPKPFFDHPARSEG* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01562 625 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Eupl07g01562 625 Gene3D Phosphorylase Kinase; domain 1 305 406 - -
Eupl07g01562 625 Pfam Wall-associated receptor kinase galacturonan-binding 36 99 IPR025287 GO:0030247
Eupl07g01562 625 PANTHER RUST RESISTANCE KINASE LR10-RELATED 299 619 IPR045874 GO:0004672
Eupl07g01562 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Eupl07g01562 625 ProSiteProfiles Protein kinase domain profile. 332 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01562 625 Pfam Protein kinase domain 335 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01562 625 Pfam Wall-associated receptor kinase C-terminal 173 245 IPR032872 -
Eupl07g01562 625 SMART serkin_6 332 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01562 625 FunFam serine/threonine-protein kinase PBS1-like 300 406 - -
Eupl07g01562 625 SUPERFAMILY Protein kinase-like (PK-like) 308 606 IPR011009 -
Eupl07g01562 625 Gene3D Transferase(Phosphotransferase) domain 1 407 617 - -
Eupl07g01562 625 CDD STKc_IRAK 338 607 - -
Eupl07g01562 625 FunFam PR5-like receptor kinase 407 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01562 Eupl-Chr7 37306955 37312279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01562 36 619 Receptor kinase-like Gene Family AT1G66910 39.677 2.18e-135 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Eupl07g01562 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01562 - - msin:131235676 570.466