Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01561 ATGTCTCAACAAGCTCACCGTCTCCAATTTCTCTTCTTCACCCTCCTCATCACCGCCCTCAGTGGCAATTCTGTATCTCCCGACTTCCCAGGCTGCCCTACTTGCGACTGCGGGGAAGGCTTTCCAATCAAGTATCCCTTTTGGGTACATAATTGTACCCAAAATTCACGGTGGTCATGCGGATACTATGGTCTCAGACTCTCCTGCGATCATTATTTTTCCCCCGGTACTTTCCTCAGCCTCTCTGGTAACACGTACGCCGTCAAGCATATCAATTATTCCGTAAATACCCTCACCGTCGTTGACATCGAAATCATGGACGATATTAGCTGTCATTGGCCCCGCCAACCCGTCAAATTAGAAAGCTTGGGCCGATTAGACTTTTCTGAAGACACTCAATTAGGAACCGTGGTGTCTAATTGCGGCCCATCCAATTCCTCCATGGAAGCACACTGTCGCTCCTATTTTATTTATTCGGGAGGAGTTTGGAATGAAACTTTGTATAAGGATTGCAAGGATAACTTTACGTATCCAGTGCTCTCCAGGGCGCTTAAGGGTGTTGGAAATAGTGATGACGAAAAAGTCATGCTAGAGGGGTTTAAATTGGTTTGGCGTCCCGACACTGCTTGCATGTTCTGTGAGTCGTCCGGCGGACTTTGCAAGTATTGGAATGAATATGATGATTATACAAGTGCTGCTGTTCAGAATTTCACTTGCTTGTGTCGGAACGGACGAGAGCATCCCCAAGACTGTAACGATTACAGAGGCTCCTCCATTAGCACCAAGGATAAATCTAGCTCGTCTCAATTTGCAGACTCCTCCATGAGAAACAAGGCAATTATTGGTACATCAAGTGTTATTGTAACAGCAATAGTTCTAGTCTTACTATTTGTCTTTAAAAAGAAACTCTCATCATACCTTCCATCGTTATGGACGAAGAAATCTAAGAATGTTAAAAATGTAGAGGAATTTTTAGAGAATTATGGATCCCTTGCTCCAAGAAGATACAAGTATTCAGATATCAAGAAAATGACAAATTCCTTCAGAGATAAACTAGGACAAGGAGGTTATGGAGGAGTGTTCAAAGGGAAGCTTGTCGACGGCCGTTTGGTTGCTGTTAAGTTATTGAGCGAGTCCAAAGGCAATGGAGACGAATTCATTAACGAGGTCGCCAGCATAAGTAGGACTTACCATGTTAATATTATGAGTCTTCTCGGCTTCTGCTCGAAGGGTCCCAAACGAGCTCTTGTGTATGAGTTTATGCCTAATGGATCACTAGAAAAGTTCATTTTTGCCAAGAAAGAAGGAAGTGAACATTCTCTCGGATGGGAAAAACTATACCAAATTGCCCTTGGCATTGCCCGAGGGCTTGAGTATTTGCATCGTGGCTGTTGCATGCGCATTCTTCATTTTGATATAAAACCTCACAATATTCTTCTAGACCAAAATTTTTGTCCCAAGATTTCCGACTTTGGGCTGGCTAAGCTATGCCCGATGATACAGAGTAATGTATCGATGATTGGCACAAGAGGAACTGTTGGTTATATTGCTCCAGAAGTATATTGTAGGAACATCGGAGGAGTTTCTTACAAGTCGGATGTTTACAGCTATGGGATGATGATGTTAGAAATGGTTGGAGGGAGAAAAAACATTGATCCAGTAGTAGAGAATACTAGTGAAATATATTTTCCGCACTGGATTTATAAGCAGCTTGAACAACAAGCAGACATAGGACTGGGACAATTTCAAGAGGTTGTCGAGGAAGAAATAGCAAAAAAGATGGTCTTAGTGGGTTTGTGGTGCATACAGACAGATCCAATGCTTCGACCTTCAATGACTAGGGTGGTGGAAATGCTGGAAGGAAGCATCGAAAGCTTACAAATGCCACCCAAGCCTTTTCTTGACTCTGCTTCCATTTAA 1920 0.4297 MSQQAHRLQFLFFTLLITALSGNSVSPDFPGCPTCDCGEGFPIKYPFWVHNCTQNSRWSCGYYGLRLSCDHYFSPGTFLSLSGNTYAVKHINYSVNTLTVVDIEIMDDISCHWPRQPVKLESLGRLDFSEDTQLGTVVSNCGPSNSSMEAHCRSYFIYSGGVWNETLYKDCKDNFTYPVLSRALKGVGNSDDEKVMLEGFKLVWRPDTACMFCESSGGLCKYWNEYDDYTSAAVQNFTCLCRNGREHPQDCNDYRGSSISTKDKSSSSQFADSSMRNKAIIGTSSVIVTAIVLVLLFVFKKKLSSYLPSLWTKKSKNVKNVEEFLENYGSLAPRRYKYSDIKKMTNSFRDKLGQGGYGGVFKGKLVDGRLVAVKLLSESKGNGDEFINEVASISRTYHVNIMSLLGFCSKGPKRALVYEFMPNGSLEKFIFAKKEGSEHSLGWEKLYQIALGIARGLEYLHRGCCMRILHFDIKPHNILLDQNFCPKISDFGLAKLCPMIQSNVSMIGTRGTVGYIAPEVYCRNIGGVSYKSDVYSYGMMMLEMVGGRKNIDPVVENTSEIYFPHWIYKQLEQQADIGLGQFQEVVEEEIAKKMVLVGLWCIQTDPMLRPSMTRVVEMLEGSIESLQMPPKPFLDSASI* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01561 639 Gene3D Transferase(Phosphotransferase) domain 1 421 629 - -
Eupl07g01561 639 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Eupl07g01561 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Eupl07g01561 639 Gene3D Phosphorylase Kinase; domain 1 318 420 - -
Eupl07g01561 639 PANTHER RUST RESISTANCE KINASE LR10-RELATED 317 633 IPR045874 GO:0004672
Eupl07g01561 639 Pfam Wall-associated receptor kinase C-terminal 163 243 IPR032872 -
Eupl07g01561 639 FunFam PR5-like receptor kinase 421 631 - -
Eupl07g01561 639 ProSiteProfiles Protein kinase domain profile. 346 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01561 639 Pfam Protein kinase domain 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01561 639 SMART serkin_6 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01561 639 FunFam serine/threonine-protein kinase PBS1-like 313 420 - -
Eupl07g01561 639 SUPERFAMILY Protein kinase-like (PK-like) 327 620 IPR011009 -
Eupl07g01561 639 Pfam Wall-associated receptor kinase galacturonan-binding 32 102 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01561 Eupl-Chr7 37281210 37287074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01561 33 632 Receptor kinase-like Gene Family AT5G38260 39.137 4.43e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Eupl07g01561 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01561 - - msin:131235676 540.806