Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01552 ATGTCGGATTTCGCGGTTCCATTCTCGATTTCTTACGGGGAATTGAAGAAGGTTCAATGGTCAGTGCTGGAATATTTGATTGTTTTGTCTTATATGGCATTCATTATAGATGCCAAATTTTCCAATTATATATTGGAAGCACCTTTGCTGTCTCCCACCGGTGCTCCATTAGCCACACCCACTATTCCTGATCTTCCCCTGCCGGCGAACCTTCCACTGTTTCATAGACCACGTCGGAAGCATTTCTCGCCTCATGGTGCCCAATTGCCTGTGCTAGTGCCAGCTCAGCCTCCGGATTATGGCCCATTATCGACTTCAGGCCATCCTCCTTCAAGTTCACGCTTATCAAAACCATCGATGAAAAGAAGCCAATTACAGTCTCCTAGTGCTGGCATTCCACCTCCTCACTTAGCAGGTGTTGCCCCAACACACTCCAATGCCGGCATAATTCCTTCTGGTTTAGTTCAACCACCATTGTCCCCTAACCTCTCTGACTGTTGTGGACCAGACATGGTGCTGAAACGAGGGAGTCGGGCTTGCCACTGTGTGTATCCAATAAAGCTTGATCTTCTCCTTCTGAATGTTTCTTTTAGCTCGAATTGGAGTCCTTTTCTGGAAGAATTAGCTTCTCAGCTTGGTCTGCGAGTTTCTCAGATTGAGATCATCAACTTTTATTTACTCAGCTTATCAAGGCTGAATATTTCAATGGATATTACTCCACATACAGGGATCAGTTTCTCTGCCAGTGACGTGGATGTGATAAATTCTTCGCTTGCTACGCATAGGATTCATCTGGACCCTACATTAGTGGGAGACTACAGACTTCTTAATTTAACCCGGTTTAAGCCCTCAGCTACTTCTCAAGTTCCCATTGCAGCTACATCACCTATAGCTACCCCACCTCATCTGTCCTCCCCTTCTACACCACACGTTGCTGCAGACAAATGGGAACATTCAAACTTTATTCTTATTCTTGGTGTTGGTGCTGGTATCCTGATCATCACCATCATTATAACAGTGCTAGTAATCTGTTCATGCACATCTTGTCAAGGAAAGAAAAAAGCACCCGTCAAAGAAACTGCAAAGCCAAGGACTCCAGATGCAGTTCCAGTTGGAGGCTCTCTTCCTCACCCCACCAGTACTCGATTTTTTGCATATGAAGAGCTTAAAGAAGCAACAAATAACTTTGAACCTGCAAGCGTGCTTGGTGAGGGTGGGTTCGGCAGGGTTTTCAAGGGTGTCTTAAGTGATGGCACTGCTGTCGCAATTAAGAAGCTTACTAGTGGAGGACATCAAGGTGGCAAAGAGTTCTTAGTTGAGGTTGAGATGCTTAGCAGGCTGCATCACCGTAATCTTGTGAAACTTGTGGGTTACTATAGCAGTCGTGACTCTTCACAGAACCTTCTTTGTTACGAGCTCATCCCAAATGGAAGCTTAGAGGCCTGGCTCCATGGTCCCTTGGGAGTAAATTGTCCTTTAGACTGGGACTCCAGAATGAAGATTGCCCTCGATGCTGCTAGAGGACTTGCCTACCTACATGAGGACTCACAACCCTGTGTCATCCACAGGGATTTCAAGGCATCCAATATATTACTTGAAAAAAACTTTCATGCTAAAGTTGCTGATTTTGGTCTGGCCAAACAGGCACCTGAAGGCCGAGAAAATTATCTGTCTACTCGTGTGATGGGCACATTTGGGTATGTGGCTCCTGAGTATGCCATGACTGGACATCTACTAGTAAAGAGTGATGTATATAGCTATGGGGTAGTCCTTCTTGAACTGTTGACTGGAAGGAAGCCTGTGGATATGTTACAACCTTCTGGCCAGGAGAATCTAGTAACTTGGACCAGGCCAATTCTTAGAGATAAGGATCGGTTAGAGGAGCTTGCTGATCCAAGGCTTGCAAGCAAGTACCCAAAGGATGACTTCGTACGTGTTTGCACAATTGCCGCAGCTTGTGTTGCTGCCGAGGCAAGCCAGCGGCCCACAATGGGAGAAGTGGTGCAGTCCCTTAAAATGGTGCAGCGCATAACAGAGTACCAAGAATCCACGTTAACCACCTCCAACACACGTCCCAACCTAGGACAGTCATCCACCACCTATGAGTCGGATGGGACTTCATCAATGTTCTCCTCTGGCCCTTTCTCTGCTCTAAGTGCCTTTGATAATGACAACATCTCTCGGACAGCGGTGTTCTCGGAAGACCTGCATGAAGGACGATGA 2223 0.4642 MSDFAVPFSISYGELKKVQWSVLEYLIVLSYMAFIIDAKFSNYILEAPLLSPTGAPLATPTIPDLPLPANLPLFHRPRRKHFSPHGAQLPVLVPAQPPDYGPLSTSGHPPSSSRLSKPSMKRSQLQSPSAGIPPPHLAGVAPTHSNAGIIPSGLVQPPLSPNLSDCCGPDMVLKRGSRACHCVYPIKLDLLLLNVSFSSNWSPFLEELASQLGLRVSQIEIINFYLLSLSRLNISMDITPHTGISFSASDVDVINSSLATHRIHLDPTLVGDYRLLNLTRFKPSATSQVPIAATSPIATPPHLSSPSTPHVAADKWEHSNFILILGVGAGILIITIIITVLVICSCTSCQGKKKAPVKETAKPRTPDAVPVGGSLPHPTSTRFFAYEELKEATNNFEPASVLGEGGFGRVFKGVLSDGTAVAIKKLTSGGHQGGKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQNLLCYELIPNGSLEAWLHGPLGVNCPLDWDSRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLEKNFHAKVADFGLAKQAPEGRENYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMLQPSGQENLVTWTRPILRDKDRLEELADPRLASKYPKDDFVRVCTIAAACVAAEASQRPTMGEVVQSLKMVQRITEYQESTLTTSNTRPNLGQSSTTYESDGTSSMFSSGPFSALSAFDNDNISRTAVFSEDLHEGR* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01552 740 ProSitePatterns Protein kinases ATP-binding region signature. 402 425 IPR017441 GO:0005524
Eupl07g01552 740 SUPERFAMILY Protein kinase-like (PK-like) 372 673 IPR011009 -
Eupl07g01552 740 Gene3D Phosphorylase Kinase; domain 1 374 473 - -
Eupl07g01552 740 ProSiteProfiles Protein kinase domain profile. 396 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01552 740 PANTHER OS01G0750732 PROTEIN 164 692 - -
Eupl07g01552 740 FunFam Receptor-like serine/threonine-protein kinase ALE2 376 473 - -
Eupl07g01552 740 MobiDBLite consensus disorder prediction 682 706 - -
Eupl07g01552 740 FunFam Receptor-like serine/threonine-protein kinase ALE2 474 690 - -
Eupl07g01552 740 CDD STKc_IRAK 402 672 - -
Eupl07g01552 740 Pfam Protein tyrosine and serine/threonine kinase 400 671 IPR001245 GO:0004672|GO:0006468
Eupl07g01552 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Eupl07g01552 740 MobiDBLite consensus disorder prediction 100 134 - -
Eupl07g01552 740 MobiDBLite consensus disorder prediction 105 130 - -
Eupl07g01552 740 Gene3D Transferase(Phosphotransferase) domain 1 474 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01552 Eupl-Chr7 37159169 37180173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01552 23 740 Receptor kinase-like Gene Family AT4G02010 68.985 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Eupl07g01552 PK_Tyr_Ser-Thr 6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01552 - - nnu:104598769 1126.69