Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01546 ATGACAGAAGATAGTGATGTAAGAGCAAATAAGCCAAAGAGAGAAGAAGAAACCCAGAAGATCTCAACAACGGATAGTTCTTCCTTTGAGAAAACAGATTCAAAGTCTTCAAGAGAACCCAAGACAGAAAATCAAGCCTCCAAAAGAAGGAAAATGGTTCAGAAGACTGTGGTGAAAGTGAGGATTGAAGCAAATGTTGGTAGACAGAAGAACGAGGGGCCACCTTCTGATTTCTGGTCTTGGAGGAAATATGGGCAAAAACCCATCAAAGGTTCTCCTTACCCAAGGGGCTATTACAGGTGCAGCACATCAAAGGGTTGTTCAGCCAAAAAGCAAGTTGAGAGATGCAGAACAGATGCTTCAATGCTCATCATCACCTACACCTCAAGTCATAACCATCCAGGCCCGGAACTGGCGGACACCAGTCACACCACCAACCTAACCCAAGAACAACCATCTGATACCCAACCCACTGAAGAACAAGAACTCCCCACCACCCCAAAACAACAGCAACCCATTATCACTAGTGAAGAAGAACTCAGTGAGGATCATCATCTCAACTATTTCCAGTCTCCCATCAATTGCTCACAAGAAATCACCAACCACCAAGAAGAGAATCCTTTAATGGAAACACTAGAGAAAACCCATAATTCATTGAGTCTTCTTTTTGAAGATGAACCACTCTCTTATCCTCATCTCATGACATCAGAAGAGAATGATTTCTTTGATGAACTTGAAGAGCTACCCACTTCTTCATCTTTTACAAGCTTTATGAGGAGCAATTTCTTTGATGAAAGGATTCTTGTTCTTCCCTAG 816 0.4228 MTEDSDVRANKPKREEETQKISTTDSSSFEKTDSKSSREPKTENQASKRRKMVQKTVVKVRIEANVGRQKNEGPPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIITYTSSHNHPGPELADTSHTTNLTQEQPSDTQPTEEQELPTTPKQQQPIITSEEELSEDHHLNYFQSPINCSQEITNHQEENPLMETLEKTHNSLSLLFEDEPLSYPHLMTSEENDFFDELEELPTSSSFTSFMRSNFFDERILVLP* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01546 271 MobiDBLite consensus disorder prediction 1 21 - -
Eupl07g01546 271 SUPERFAMILY WRKY DNA-binding domain 72 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl07g01546 271 MobiDBLite consensus disorder prediction 31 50 - -
Eupl07g01546 271 SMART WRKY_cls 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g01546 271 ProSiteProfiles WRKY domain profile. 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g01546 271 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 255 IPR044810 GO:0003700
Eupl07g01546 271 FunFam WRKY transcription factor 65 50 136 - -
Eupl07g01546 271 MobiDBLite consensus disorder prediction 128 172 - -
Eupl07g01546 271 Pfam WRKY DNA -binding domain 77 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g01546 271 Gene3D WRKY domain 59 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl07g01546 271 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01546 Eupl-Chr7 37114787 37117159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01546 32 269 WRKY Transcription Factor Family AT4G01250 39.419 3.05e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl07g01546 WRKY 2.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01546 - - nnu:104605070 330.102