Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01543 ATGATGAATGCCTTGTTCTCATTTGATCCCTTTGATTTCAGTGGAATTGATCCTCATCAAGGTTATGGGACGACAGAGGAAGGAGTGATCAAAGGGAAACAAAATGATTTGCTTGGAATAGAAGATAAGGGAGATATTGATTATCTTTATTCTGAATATGGCTTCAATCAAGAAAACACTCCACAGAAACTAGTCCTATTGTCCAAAGATCAACAACAATCAATTTCAGATTTTGGGATGTTCGATGATTTTATCTTCGATGTCGTTCCCCCGCCAATTCAATCATTCCAAGAATCTGGAAAGCTGGAGCCCATCCTAACTGAAATTTCGAATCCTGTCGAACCCATAAAGAAAAACTGGTGTCCAATCTCTTCAACATCATTAGAGATTCTAAATAACTACAGAAGTGGGTTCAAGAGATTGAATGGCGAAAAACTAAACGAGCAGCACGAAGAAACATGTACAACTGTAGAAGGCCGAAGATTATCAACTGAAGAAGTGATGAGGATTGCTGGAGCACAGTACATCCAATTCAATGTCCAAAAGGATGATGATCTTGCCATGTTTAGACATCCCTTTGGTTGTGCTCTTTCGGGTCTTGGCGACGAGGAAACCAAAGATGTGGAACTTGCCCACCTTCTTCTAGCCTCGGCTGAAAAGGTAGAACATCAGCAATATGATCGAGCGAACAAATTGCTCAGTCAGTGTGAGCACTTGTCGTCATGTACTGGAAGTCCTGTTCAGAGAGCTGTTTACTACTTTGCTGAAGCTCTTCGAGCGAGGATCGATCGACAAAATGGGAGAATCCCATCACTGGAAATGGGTAAAGGAATACAACCAGTAAATCTAGAAGAGGAATTCATGAGTCCTAACCCAGCTCTTCTGGCATATCACATAGAACTTCCCTTCTCTCAAGTGTTGCACTTTGCAGGAATGCAAGCCATCATGGATAATGTGGTGTTAGCAAAGAAGATTCATTTGATCGATCTTGGAATCAGGACCGGAATGCAATGGACAGTCTTGATGCAAGCTCTTGCATCAAGATATGAATGCCCGCTCGAGCTTTTAAAGATTACTGCTGTTGGAACAGCATCACAACAGAAGATGGCGGAGACTGGTGAGAGGTTGGTAAATTTCGCCAAAACCATGAACTTACCTTTTTCATTCAAGGTAGTTATTGTATCAGACATGAAAAATCTCAAGGAAGATTTATTTGAGTTAGAGGCTGATGAAGCAGTCGTCGTCTATTCTCCAATGTTACTGAGGATCATGCTCGCAAAGCCTGATCGCTTAGAAATTGTAATGAAAGTGATCAAGAAACTTAGACCTTGTATAATGGTGGTCAGTGAAATCGAAGCGAACCATAATTCGCCGTCTTTTGTGAACCGATTCATTGAAGCTCTCTTCTTCTATAGTGCATTATTCGATTGCGTCGAAACTTGTATGGATCGACGCAATCAGAATAGAATGACGATTGAAGGGGTATTCTATGGTCAGACAATTCGGAACATTGTTGTAAGTGATGGAGTGGAGAGGACGATTCGGCATGTGGGGATTGATATGTGGAGAGCATTCTTCGCACGGTTTGGCATGGTGGAGACACAATTGAGTCAGTCATCATTATATCAAGCTAGCCTGGTTGTTAAACAGTTTGCTTGTGAGAGTTCTTGCACCCTTGATATGAATGGCAAATGTTTAACTGTTGGGTGGAAGGGAACTCCAATTCATTCTCTTTCTGCTTGGAAATTTCATTGA 1755 0.4148 MMNALFSFDPFDFSGIDPHQGYGTTEEGVIKGKQNDLLGIEDKGDIDYLYSEYGFNQENTPQKLVLLSKDQQQSISDFGMFDDFIFDVVPPPIQSFQESGKLEPILTEISNPVEPIKKNWCPISSTSLEILNNYRSGFKRLNGEKLNEQHEETCTTVEGRRLSTEEVMRIAGAQYIQFNVQKDDDLAMFRHPFGCALSGLGDEETKDVELAHLLLASAEKVEHQQYDRANKLLSQCEHLSSCTGSPVQRAVYYFAEALRARIDRQNGRIPSLEMGKGIQPVNLEEEFMSPNPALLAYHIELPFSQVLHFAGMQAIMDNVVLAKKIHLIDLGIRTGMQWTVLMQALASRYECPLELLKITAVGTASQQKMAETGERLVNFAKTMNLPFSFKVVIVSDMKNLKEDLFELEADEAVVVYSPMLLRIMLAKPDRLEIVMKVIKKLRPCIMVVSEIEANHNSPSFVNRFIEALFFYSALFDCVETCMDRRNQNRMTIEGVFYGQTIRNIVVSDGVERTIRHVGIDMWRAFFARFGMVETQLSQSSLYQASLVVKQFACESSCTLDMNGKCLTVGWKGTPIHSLSAWKFH* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01543 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 161 571 IPR005202 -
Eupl07g01543 584 Pfam GRAS domain family 210 582 IPR005202 -
Eupl07g01543 584 ProSiteProfiles GRAS family profile. 201 582 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01543 Eupl-Chr7 37091761 37093515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01543 200 583 GRAS Transcription Factor Family AT3G03450 31.701 1.29e-60 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl07g01543 GRAS 1.5e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01543 - - pvy:116122852 609.372