Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01542 ATGATGAATGCCTTGTTCTCATTTGAGCCCTTTGATTTCAGTGGAGCTCAAGGTGTTAATAGTCCTCATCAAGGTTATGGGACGACAGAGGAAGGAGTGATCAAAGGGAAACAGAATGATTTGTTTGGAATAGAAGATAGGGGAGATAATGATTATCTTTGTTCTGAATATTGCTTCCCTGAAAACAACACTCCTCGGAAACTAGTCCTATTGTCCAAAGATCAACCACCAACACCAATTTCTGATTTTGGGATATTGGATGATTTTCACTTCGATGTTGTTTCCACACCAATTCAATCATCCCAAGACTCTGTGAGGCTGGAATCCATTCTTACTGAAATTTCAGATCTTGTTGAACCCAAGAAGTCGAAGCGGTGTCCAATCTCTTTAGCATCATTAGAGCTTCTAAACAAGTATAGAAGCGGGGTCAAGAGATTGAACGGGGAAAAACTAAACGAGCAGCACAGAGAAACAGATACTACTGTAGATGGTCGAAGATTATCAACTGAAGAAGTCATGAGGGTCGCTGGAGCACAGTACATCCAACACTCAGACAAAAAAGATAATGATCTCTCCATGCTTAGACATCCCTTTGGCTATGCTCTTTTGGGTCTCAGTGACGAGGAAACCAAAGATGTACAACTCGCCCATTTTCTTCTAGCCTCAGCTGAGAAGGTAGAACATCAGCAATTTCATCGAGCGAACAAATTGCTTACCCAATGTGAGCACTTGTCGTCATGTACTGGAAGTCCTGTTCAGAGAGCTGTTTTCTACTTTGCCGAAGCCCTTCGAGAGAGGATCAATCGACAAACTGGGAGAATCCCATCACAGGAAATGGGAAAAGGAATACAGCCATTAGAAGTCGAAGAGGAGTGGATGGGTCCTAACCCGGCAATTCTGGCATATCACCAAGAACTTCCCTTCTCTCAAATGTTGCACATTGCAGGAATGCAAGCCATCATGGAGTATGTTGCTTCAGCGAAACAGGTGCATTTGATCGATCTCAGGATCAGATTTGGAATGCATTGGACAGTATTGATGCAAGCTCTTGCATCTAGAAATGAATGCCCACTGGAGCTTTTAAAGATAACTGCTGTTGGACTTGGAACAACATCAAAACAGAAGATCGAGGAGACAGGTAAGCGGTTAGTAAGTTTCGCGAAAACCATGAACTTACCATTTTCATTTAAGGTAGTTATAGTTTCAGACATGAAAGATCTGAAGCAAGATTTATTCGAGTTAGAAGCTGAAGAAGAGGTTGTGGTCTATTCATCATTTTTTTTGAGAACCATGATTGCACAACCTGATTGCTTAGAAAGTCTAATGAGAGTGATTAGGAACATCAGCCCTGGTGTAATGGTTGTCTCAGAAATGGAAGCAAACCATAATTCGCCGTCGTTTGTGAATCGCTTCATTGAAGCTCTCTTCTACTACAGTGTATTATTCGATTGCGTTGAAACTTGTATGGATCGAAACAATCAGAATAGATTGACAATTGAAGGGAGATTCATTCGTGGGGCGATTCAGAACATTGTTGCAAGTGAGGGAGAGGAGAGAACGATGCGGCATGTGGGGATCAATGTGTGGAGAGCGTTCTTCGCACAGTTTGGCTTGATGGAGACAGAACTGAGCCAGTCGTCCTTGTATCAAGCTAGCCTGGTTGTTAAGCAGTTTGCTTGTGGGAGTTCTTGCACCCTTGATATGAATGGCAAATGTTTAACTGTTGGGTGGAAGGGAACTCCAATTCATTCTCTTTCTGTTTGGAAATTCCATTAA 1776 0.4229 MMNALFSFEPFDFSGAQGVNSPHQGYGTTEEGVIKGKQNDLFGIEDRGDNDYLCSEYCFPENNTPRKLVLLSKDQPPTPISDFGILDDFHFDVVSTPIQSSQDSVRLESILTEISDLVEPKKSKRCPISLASLELLNKYRSGVKRLNGEKLNEQHRETDTTVDGRRLSTEEVMRVAGAQYIQHSDKKDNDLSMLRHPFGYALLGLSDEETKDVQLAHFLLASAEKVEHQQFHRANKLLTQCEHLSSCTGSPVQRAVFYFAEALRERINRQTGRIPSQEMGKGIQPLEVEEEWMGPNPAILAYHQELPFSQMLHIAGMQAIMEYVASAKQVHLIDLRIRFGMHWTVLMQALASRNECPLELLKITAVGLGTTSKQKIEETGKRLVSFAKTMNLPFSFKVVIVSDMKDLKQDLFELEAEEEVVVYSSFFLRTMIAQPDCLESLMRVIRNISPGVMVVSEMEANHNSPSFVNRFIEALFYYSVLFDCVETCMDRNNQNRLTIEGRFIRGAIQNIVASEGEERTMRHVGINVWRAFFAQFGLMETELSQSSLYQASLVVKQFACGSSCTLDMNGKCLTVGWKGTPIHSLSVWKFH* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01542 591 ProSiteProfiles GRAS family profile. 206 589 IPR005202 -
Eupl07g01542 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 173 578 IPR005202 -
Eupl07g01542 591 Pfam GRAS domain family 216 589 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01542 Eupl-Chr7 37087550 37089325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01542 205 590 GRAS Transcription Factor Family AT3G03450 32.051 1.07e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl07g01542 GRAS 3.2e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01542 - - pvy:116122852 597.045