Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01517 ATGGAAAGCAGCGTCTCCGGTCGACTTGCAGGTTGGGGGATTCATGGATTTCATACAATGGAAGATTTAGATATTGGGAAGATAATGGAGGAAGCAGCGACAAGGTGGCTGCGGCCAAATGAGATTCTTGCAATACTCTGTAATTACACCCTTTTCAAAATCCATGTCAAGCCAATGCACTTGCCAAAAAGTGGTACAATTGTATTGTTCGACCGTAAAATGCTAAGGAACTTCCGGAAAGATGGCCATAACTGGAAGAAGAAAAAGGATGGGAAGACTGTCAAAGAAGCTCATGAACACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTGTACTATGCACATGGACAGGATAACCCCAGTTTTGTTCGCAGGTGTTACTGGCTACTGGATAAGAAACATGAACACGTAGTCCTTGTACATTATCGTGAAACATTAGAGCTGCAGGGTTCTCCGGTCACACCTGTTAATTCAAATTCAGGTTCAACCTACTCAGACACATCTACTTCCAGGGTTTTATCAGAAGAAAATGATTCTGGGGCCAATCATGCATTTTATTCTGGTTCTGGCACTTCTCCTGTCGGCGAATCAATTGAGCTTGGTGATAATATGACTGTGAGGAGTCATGAATTGAGACTTCATGAGATTAACACGTTTGAGTGGGAAGATCTGTTGGTGTCAAATAATCCAAATGATTTTACTGCACCTAGAAAAGATGACATTTCTTTCCTTGAGCAATGGAATCAATATGAGATAAATGACTCCGAAAGTAATGGTAGCGCTTTCTTATCCGACAATATACCTGGCGGGATATCTTCAATTGGGCATTCAATGCAGCCAATCGCTAGAAGTGGTTCTTTCGATGCTAAACTACCAATCAGTGGATACCTTCAGAACATGGGAAATCAAACAAACTCAAATATCCAGAGAAAAGACTTTGAATTGGTTACAGGTGGCACAGTTGAATCTTTGGACATGTTTGTCAAAGATGGTTTGGAAACTCAGGACAGTTTTGGAAGGTGGATTAACGACGTCATGACTGAGTCCCCAGGCTTATTAGACAACCTCCCAGATAAGTCCCCAATTTCAACTGGTCATGAACCAAGTATATCTGCGGTGATGGATCTGTCTTCTGTTCAAGAGCAAATTTTCAGTATAAATGACATTTCACCTGCGTGGGCTTTTTCAACGGAAGAAACAAAGGTCATAGTGATTGGATATTTTCATGGGGTCCATTCACATCTTTCAGAGTCCAATTTACTATGTGTCTTTGGCGATGTATGTGTTCCTGCAGAAATGGTTCAACTTGGGGTATTCCGTTGTACGGCGTTACCTCGTACCCCTGGTTTAGTAAATTTTTATTTGAGTCTTGATGGTTGTACACCCATTAGCCAAGTTCTGACTTTTGAGTATCGCTCTCCTTCAATGGAGATTGGGATGGCTTCGCCAGAAGATAAGTCTAAGTGGGAAGAGTTTCAAATCCAGATTAGGCTTGCTCGTATGCTCTTCTCTACGACCAACAGCCTGAACATTATATCAAGCAAGGTATCACCAAATTCCCTGAGGGAAGCTAAAGATTTTGCACAGGTAACCTCCTCCATTCACAAAGATTTAGCAGGTTTGATTAAGTCAATTGGGAACAATGCGATCTCACTTCCACAAGCCAGTAACAGCTTGTTTGAGATCACTTTGAAGAACAAGTTACAGGAGTGGCTTTTGGAAAAAGTGGTTGAAGGGTGTAAGACTCCTATCCGTGATCATCAAGGTCAAGGAATCATCCATTTGTGCGCTATCCTCGATTATGCATGGGCTGTCCGTCCATATTCACATTCAGGCCTCTCAATAGATTTTCGGGATTCTCTTGGACGGACAGCATTGCACTGGGCTGCATACTATGGAAGGGAAAAAATGGTTGCAGCTCTTTTATTTGCAGGAGCAAATCCAAGCTTAGTCACTGACCCCACCTCAGAATTCCCTGGTGGATGCACTGCTGCTGATCTTGCATCCAAAAATGGTTATGATGGCTTAGGTGCTTATCTTGCAGAGAAGGGATTAGTAGTACATTTCGAAAATATGTCCTTACATGGAAATATTAGTGGCTCCCTGCAAACTAGCACAACCGATTTGGTAAACCCAAGTGACCTCAATGAAGAGCAGCTGTGTCAGAAGGATACATTAGCTGCATATCGGACAGCTGCTGATGCAGCAGCCCGTATACAGGCTGCATTCAGGGAGAACTCGCTAAAGCTACGGACAAAAGCCGCTCAGTTTGCCAATCCAGAGATTGAAGCACGCAATATAATTGCTGCAATGAAGATTCAGCATGCCTTTCGCAGGTATGGGACACAAAAGAGGATGGCTGCTGCTGCCCGAATCCAACATAGGTTCCGTACTTGGAAGATCCGAAAAGATTTTCTCAATATGCGTAGGCAAGCGATCAGAATTCAAGCTGCTTTCCGAGGCTACCAAGTGCGGAAGCAGTACCGCAAGATTCTTTGGTCTGTCGGAGTGCTTGAGAAGGCAATTCTACGGTGGCGTCAAAAGAGAAAGGGCTTCCGTGGGCTTCAAGTTGAATCAACTGAAGTTGTTGAAGTAGATCAGAAGCAAGAAAATGATATGGAAGAGGACTTCTTCCGAGTCAGCCGGAAGCAAGCTGAAGAGCGTGTTGAGAGATCGGTTGTACGGGTCCAAGCCCTGTTCCGATCACACCAAGCACAACAAGAGTATCGGAGAATGAAGCTGGCCTATGATCAAGCTAAGTCGGAATTTGAAGGGTGTCCTGAACCTGAAGTTGGAACTGATAGGTGA 2808 0.4363 MESSVSGRLAGWGIHGFHTMEDLDIGKIMEEAATRWLRPNEILAILCNYTLFKIHVKPMHLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPSFVRRCYWLLDKKHEHVVLVHYRETLELQGSPVTPVNSNSGSTYSDTSTSRVLSEENDSGANHAFYSGSGTSPVGESIELGDNMTVRSHELRLHEINTFEWEDLLVSNNPNDFTAPRKDDISFLEQWNQYEINDSESNGSAFLSDNIPGGISSIGHSMQPIARSGSFDAKLPISGYLQNMGNQTNSNIQRKDFELVTGGTVESLDMFVKDGLETQDSFGRWINDVMTESPGLLDNLPDKSPISTGHEPSISAVMDLSSVQEQIFSINDISPAWAFSTEETKVIVIGYFHGVHSHLSESNLLCVFGDVCVPAEMVQLGVFRCTALPRTPGLVNFYLSLDGCTPISQVLTFEYRSPSMEIGMASPEDKSKWEEFQIQIRLARMLFSTTNSLNIISSKVSPNSLREAKDFAQVTSSIHKDLAGLIKSIGNNAISLPQASNSLFEITLKNKLQEWLLEKVVEGCKTPIRDHQGQGIIHLCAILDYAWAVRPYSHSGLSIDFRDSLGRTALHWAAYYGREKMVAALLFAGANPSLVTDPTSEFPGGCTAADLASKNGYDGLGAYLAEKGLVVHFENMSLHGNISGSLQTSTTDLVNPSDLNEEQLCQKDTLAAYRTAADAAARIQAAFRENSLKLRTKAAQFANPEIEARNIIAAMKIQHAFRRYGTQKRMAAAARIQHRFRTWKIRKDFLNMRRQAIRIQAAFRGYQVRKQYRKILWSVGVLEKAILRWRQKRKGFRGLQVESTEVVEVDQKQENDMEEDFFRVSRKQAEERVERSVVRVQALFRSHQAQQEYRRMKLAYDQAKSEFEGCPEPEVGTDR* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01517 935 ProSiteProfiles IQ motif profile. 808 832 IPR000048 GO:0005515
Eupl07g01517 935 Pfam Ankyrin repeat 622 652 IPR002110 GO:0005515
Eupl07g01517 935 Coils Coil 902 922 - -
Eupl07g01517 935 SMART CG_1_2 28 146 IPR005559 GO:0003677
Eupl07g01517 935 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 921 - -
Eupl07g01517 935 ProSiteProfiles IQ motif profile. 890 918 IPR000048 GO:0005515
Eupl07g01517 935 Gene3D - 564 757 IPR036770 -
Eupl07g01517 935 Gene3D - 783 832 - -
Eupl07g01517 935 SMART ANK_2a 621 650 IPR002110 GO:0005515
Eupl07g01517 935 SMART ANK_2a 660 689 IPR002110 GO:0005515
Eupl07g01517 935 ProSiteProfiles IQ motif profile. 785 811 IPR000048 GO:0005515
Eupl07g01517 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 732 835 IPR027417 -
Eupl07g01517 935 SUPERFAMILY Ankyrin repeat 570 691 IPR036770 -
Eupl07g01517 935 FunFam Calmodulin-binding transcription activator 2 784 832 - -
Eupl07g01517 935 SUPERFAMILY E set domains 386 472 IPR014756 -
Eupl07g01517 935 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Eupl07g01517 935 Gene3D Immunoglobulins 379 476 IPR013783 -
Eupl07g01517 935 Pfam IQ calmodulin-binding motif 890 910 IPR000048 GO:0005515
Eupl07g01517 935 Pfam IQ calmodulin-binding motif 810 829 IPR000048 GO:0005515
Eupl07g01517 935 ProSiteProfiles Ankyrin repeat region circular profile. 621 647 - -
Eupl07g01517 935 SMART iq_5 807 829 IPR000048 GO:0005515
Eupl07g01517 935 SMART iq_5 784 806 IPR000048 GO:0005515
Eupl07g01517 935 SMART iq_5 888 910 IPR000048 GO:0005515
Eupl07g01517 935 ProSiteProfiles Ankyrin repeat profile. 621 653 IPR002110 GO:0005515
Eupl07g01517 935 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01517 Eupl-Chr7 36724175 36739521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01517 28 928 CAMTA Transcription Factor Family AT3G16940 51.876 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Eupl07g01517 CG-1 1.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01517 K21596 - nnu:104598807 1229.16