Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01511 ATGCTTCAAAACGAGGAAGATTCACCGTACGATAGCTCGTCGAAGATGTTTCTCGGCGTCCGTTTCATTCTGCTCGGTTTCGATTTCGTCCAAGAAGCCAAGGTTAGGTCCAAGCTTATTAATGGCGGTGGAGTTGATGCCCGCGAGTACGGTCCGAATTGCACACACGTGATCGTGGACAAGCTTGTTTATGATGATTCTAATTGTGTTGCTGCACGAAGTGATGGCAAAACACTTGTTACCGGATTATGGGTTGATCATAGTTACGATATTGGAATGCCCGATGATGCCACCTCGATTTTATACAGACCTGTAAAAGATTTGAATGGAATACCGGGTGCCAAGTTGCTGTGTATTTGCTTGACAGGATACCTAAGGCAAGATCGAGATGATATTATGAGAATGGTAGGCTTGATGGGTGCACACTTCTCCAAGCCTTTGGTAGCAAACAAAATCACTCATCTTATATGCTACAAATTCGAGGGTGAGAAGTATGATCTTGCAAAGAAAATGAAGAAGATAAAGCTTGTAAATCATCGATGGTTGGAAGCCTGTTTAAGAGCATGGGAAATTCTTCCAGAAGGAAATTATAACAAGAGTGGTTATGAGTTAGAGATAATGGAAGCTGAAGCTAAGGACTCTGAAGAAGAAACAGAAGAGAATAGAGATACTAAACATTTTAGTGAGAGAAATATTGCAGGGTATCCTTCTAACCTGCAAGGTGGAAGTGGATCTATGATTCCGAAGGGCTCCGAGTTGCCCATACCAGTAGTGGAAGTGTCGAAGATCCACCAAAAGGCTGTTGCACTTGAAGGCTCGTCAGATTTTCCTGAAGAGATTGCCACTATTAATAGGTTATTAACTACTCCTGGAAAAGAGCCTAGAACTGAAAAAGCTCCGGACTTAAATGATGTAAATAAAGAAGGCCTTGAGGAGTTTGCTTGTCAGGGCACTGGAGCTTATTGTGGGGATCCAGTTAGTGGTGGGTTGCCCTTAACATATCACAAAACTCCCAACTTTAGCAAAGGAGGCAGTGGATTGACATCTAACACGAGAACTTCTAAAAGATCCCCTCCTTCTGATGCAGCCGAGTACAGTACTCTAAGTTACTCAGGGAAAACCCCAAGGAGATCCCCAGTTTCAATCTTTTCAGAACTGTCAAGTCATGTACGTGGTTCTCCTCAGGGACATTTAGAGGAATACAAAGACAAGGATGGTTTTGACATCTTACCATCAAAATTAGAACAAGATAGGGATAACCTTGATTTCAGTGGAATCCAAATTCTCAGGAATGACACAGAGTTGCATCATGGGGAAGGGAAAAGAGGTACATTGCCTCAGAAGAGAAAGGCAGCTCATTCTTTAACTAGCTCTGTATCACCAAAGAAAGGGAGTCTCGAGTCAAAAGCTTGCCCCACTGGAAATCAGTCCGCGAGTACTAGATCTGAAGGATTGATGATTGGTGCACCCCAGCTGAAATCTATCCCTTCCTGTGGCTACAGTAGCCATCCAATGGAAGGGCTTGCCATTGTAAATATTGTAGAGGACCAATCTGCCAATGTGTCAAAAGCTAAGTCCATAAGTTTTAACAGGAAATCATTGAAACGTGGACTGCCTGTTTTGGGAACTATGACTTCTGAGAGTACTAAATCTCCTTCAGAAGTTAAAGTTTCAGACTCTACTAAGGAAAGTAAACCTGAAAGATTTTCGGGTGGATTGAAACAGTCTAACTTGACTGTTGAGCCTGATGATGGGGTGGTCAGGATGAGCAAATCAAAAGAACTTTTGGCTGGGAAAACAGGGAATCCCCAGGGACAGCAGCAGGATGATGAGGTCTCATCTCCCAATACCAGAAACTCCGAGATTGAGAAGTCCAGAGGTCCTGCTAGCTTGGGAGTACTCAAAGGAAGGAACAATGAAACATCTTCAAGATCACATACTAAGAAGATGGTAGCTAAGAAGAGTTTGTGCTCTAGGCCTAAGCTAAGTACAGGTAACACTAACAAGCACAAAGGTTCCTTTTACTTGGATAAAACAGTCACTGAAAATGAAGCTACATTCTGTTCAGTAGAAGGCAAAAATGGAGCAGAGAATGAAAAGATAATTAGTGTTGAGCCTGGGATGGCTCGACCAACTTTTAAAACAGATTCAGTCATCAAGGAAAAGGTGAAGGGGGTCTTGTGTTCTGCTAATAAAATCAAGAATAATACTGTATGCATGGATGATGAGACTGAGGCTCCAGAGGAATACAATGATGGAGTAGAGTTTGAGAAGGGAGTTAATGAGATGGCCGGACAAACTTCTAAATCAGATGTAGCCATGGAAGAAAAGTCAGAAGGGGAGCAGCATTTAGCAAACGAAACAAAGGGACATACTGTATGCATGGATGATAAGACACCCACTTCAGGGGAAGATGGAGCAGTGCTTGAGAAGGCAGCTCGTGGCAAGAAGACTGAGGTGGGTGGGTCGACTTTTAAAGCAGATGCAGTGGAGGTAATGACAACAGGGGGAAAACATCCTTCAAGTAAAACCAAGAAAAAGTCTGTGTCTTCTGTGAAAGAGATAGAGACATCTGAGAAAGCCGAAGATGGAGCAAAGCTCGAGAATAAAACTAATGATGAGAAGATGGAGATGCGGAAGACAAAAGAGGTGCTATGTCCTGCAAGTAAAACCAAGTGTAAGACTGTAATTGTGAATAAGACAGAGAAGTCCATGGATGCAGAGAAGGAAAACGGGCCAATTGCAAATGGAGGCCGGAATGTGAACCCAGGTAAACATAGGAAGGCAAAAGTGGCTGTTATATCTAATAGAACACCAATGCAGATCAGTAAAATGGTCAGCGTAAATGATCCGGATGGAAGGCAAGCAGGTGGTGAGGGCTCAGATTTTGTGAAGTCTGATCCTATGTGGTTTATACTGAGTGGACACCGTCTACAAAGAAAGGAATTCCAACAATTTATAAGGCGTTTGAAGGGAAGACTTTGCAGGGATTCCCACCACTGGTCGTATCAGGCTACACACTTTATTGTCCCAGATCCGATTCGAAGAACAGAGAAATTCTTTGCTGCTGCAGCATCTGGAAGATGGATTCTTAAGACAGATTACTTATCTGCTAGTAATCAGGCAGGAAGGTTCTTGGCAGAAGAGCCTTATGAATGGTTCAAGCATGGCCTTAGTGAAGAAGGTACAATCAATTTAGAGGCTCCAAGAAAGTGGCGCCTTTTAAGAGAAAGGACTGGTCATGGCGCCTTCTATGGAATGCAAATTATCATATACGGGGAATGCATCGCACCCCCTCTGGATACTCTGAAGCGTGTGGTGAAGGCTGGAGATGGGACCATTTTAGCGACTTCCCCACCTTACACCCGTTTCCTCAAATCTGGAGTTGATTTTGCCATTGTTAGCCCCGGCATGCCTCGTGTCGATTCATGGGTCCAGGAGTTCTTAAGACATGAGATCCCCTGCATTGTGGCGGACTATTTGGTGGAGTACGTGTGCAAGCCTGGTTACTCCCTTGATAGACATGTGCTCTATAAAACTCACGCTTGGGCAGAGAAGTCATTTGCAAACATGTTAAGTCGATCGGAAGAGATTGTTAACGCCTCAATGCCATTGGACAGTGATGACTCTGATGATCTCACGTGCCAAGTCTGCGGGTCCCGCGACAGAGGAGAGGTGATGCTGGTTTGTGGTGATGAGAGTGGTTCTATGGGTTGTGGGGTTGGTACCCATATTGATTGCTGTGATCCTCCCCTTAAATCTGTTCCGAAGGAGGATTGGTTTTGTCCAAGGTGTAGTAAAAGCAGAGACAGCACCAACCTTCCAAAGAGTACCAAGAAAGGATCCTCTTTATCGAAGTATAAGTGA 3867 0.4391 MLQNEEDSPYDSSSKMFLGVRFILLGFDFVQEAKVRSKLINGGGVDAREYGPNCTHVIVDKLVYDDSNCVAARSDGKTLVTGLWVDHSYDIGMPDDATSILYRPVKDLNGIPGAKLLCICLTGYLRQDRDDIMRMVGLMGAHFSKPLVANKITHLICYKFEGEKYDLAKKMKKIKLVNHRWLEACLRAWEILPEGNYNKSGYELEIMEAEAKDSEEETEENRDTKHFSERNIAGYPSNLQGGSGSMIPKGSELPIPVVEVSKIHQKAVALEGSSDFPEEIATINRLLTTPGKEPRTEKAPDLNDVNKEGLEEFACQGTGAYCGDPVSGGLPLTYHKTPNFSKGGSGLTSNTRTSKRSPPSDAAEYSTLSYSGKTPRRSPVSIFSELSSHVRGSPQGHLEEYKDKDGFDILPSKLEQDRDNLDFSGIQILRNDTELHHGEGKRGTLPQKRKAAHSLTSSVSPKKGSLESKACPTGNQSASTRSEGLMIGAPQLKSIPSCGYSSHPMEGLAIVNIVEDQSANVSKAKSISFNRKSLKRGLPVLGTMTSESTKSPSEVKVSDSTKESKPERFSGGLKQSNLTVEPDDGVVRMSKSKELLAGKTGNPQGQQQDDEVSSPNTRNSEIEKSRGPASLGVLKGRNNETSSRSHTKKMVAKKSLCSRPKLSTGNTNKHKGSFYLDKTVTENEATFCSVEGKNGAENEKIISVEPGMARPTFKTDSVIKEKVKGVLCSANKIKNNTVCMDDETEAPEEYNDGVEFEKGVNEMAGQTSKSDVAMEEKSEGEQHLANETKGHTVCMDDKTPTSGEDGAVLEKAARGKKTEVGGSTFKADAVEVMTTGGKHPSSKTKKKSVSSVKEIETSEKAEDGAKLENKTNDEKMEMRKTKEVLCPASKTKCKTVIVNKTEKSMDAEKENGPIANGGRNVNPGKHRKAKVAVISNRTPMQISKMVSVNDPDGRQAGGEGSDFVKSDPMWFILSGHRLQRKEFQQFIRRLKGRLCRDSHHWSYQATHFIVPDPIRRTEKFFAAAASGRWILKTDYLSASNQAGRFLAEEPYEWFKHGLSEEGTINLEAPRKWRLLRERTGHGAFYGMQIIIYGECIAPPLDTLKRVVKAGDGTILATSPPYTRFLKSGVDFAIVSPGMPRVDSWVQEFLRHEIPCIVADYLVEYVCKPGYSLDRHVLYKTHAWAEKSFANMLSRSEEIVNASMPLDSDDSDDLTCQVCGSRDRGEVMLVCGDESGSMGCGVGTHIDCCDPPLKSVPKEDWFCPRCSKSRDSTNLPKSTKKGSSLSKYK* 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 835 872 - -
Eupl07g01511 1288 Gene3D BRCT domain 1 96 IPR036420 -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 432 481 - -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 847 872 - -
Eupl07g01511 1288 ProSiteProfiles BRCT domain profile. 119 199 IPR001357 -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 432 446 - -
Eupl07g01511 1288 SUPERFAMILY BRCT domain 117 198 IPR036420 -
Eupl07g01511 1288 Pfam PHD-finger 1215 1267 IPR019787 -
Eupl07g01511 1288 Pfam BRCA1 C Terminus (BRCT) domain 977 1038 IPR001357 -
Eupl07g01511 1288 Gene3D BRCT domain 964 1079 IPR036420 -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 333 379 - -
Eupl07g01511 1288 Pfam twin BRCT domain 117 181 IPR001357 -
Eupl07g01511 1288 ProSiteProfiles BRCT domain profile. 971 1053 IPR001357 -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 450 481 - -
Eupl07g01511 1288 SMART BRCT_7 14 92 IPR001357 -
Eupl07g01511 1288 SMART BRCT_7 105 189 IPR001357 -
Eupl07g01511 1288 SMART BRCT_7 961 1043 IPR001357 -
Eupl07g01511 1288 SMART BRCT_7 1081 1168 IPR001357 -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 338 379 - -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 904 926 - -
Eupl07g01511 1288 Gene3D BRCT domain 1080 1182 IPR036420 -
Eupl07g01511 1288 SUPERFAMILY FYVE/PHD zinc finger 1205 1269 IPR011011 -
Eupl07g01511 1288 Gene3D BRCT domain 105 231 IPR036420 -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 597 624 - -
Eupl07g01511 1288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1201 1286 IPR013083 -
Eupl07g01511 1288 SUPERFAMILY BRCT domain 969 1053 IPR036420 -
Eupl07g01511 1288 CDD BRCT_TopBP1_rpt7 968 1043 - -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 1264 1288 - -
Eupl07g01511 1288 SUPERFAMILY BRCT domain 13 95 IPR036420 -
Eupl07g01511 1288 ProSiteProfiles BRCT domain profile. 12 85 IPR001357 -
Eupl07g01511 1288 ProSiteProfiles Zinc finger PHD-type profile. 1212 1268 IPR019787 -
Eupl07g01511 1288 Coils Coil 204 224 - -
Eupl07g01511 1288 SMART PHD_3 1214 1266 IPR001965 -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 540 664 - -
Eupl07g01511 1288 MobiDBLite consensus disorder prediction 1266 1288 - -
Eupl07g01511 1288 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 767 1280 IPR044254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01511 Eupl-Chr7 36636139 36643254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01511 135 279 Core DNA Replication Machinery Family AT4G02110 52.414 4.19e-36 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Eupl07g01511 BRCT 2.7e-05 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01511 K10728 - nnu:104598819 1291.56