Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01505 ATGGCTCAGTCCGGAAGTAATGCGGTTGGAGTTGACAATACTTTTAGAAGAAAATTTAACCGAGAAGAGTATTTAGAACGAGCTCGTGAGCGGGATGAAGAGGAGGAGGGGCATTCTAAATCCAAACCAAAAGGTCCCCCGGTGCAAAGGAAACCTTTGAAGCACAGGGATTATGAAGTAGACCTTGAATCTCGCTTGGGGAAAACTCAGGTTGTTACTCCAATCGCACCTCTGAGCCAGCAGGCTGGATACTTCTGTTCGGTCTGTGAATGTGTAGTAAAGGATTCCGCAAACTACTTGGACCATATTAATGGGAAGAAACATCTAGATGAGCGGATCTTAAAACAGCAGCAAGAAGAGGAAGAACGGAAGCGCCAGCGCCGAGAAAGGAAGAAAGAGAAGAAGGCAAACATCAGGGAGTAG 423 0.4634 MAQSGSNAVGVDNTFRRKFNREEYLERARERDEEEEGHSKSKPKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPIAPLSQQAGYFCSVCECVVKDSANYLDHINGKKHLDERILKQQQEEEERKRQRRERKKEKKANIRE* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01505 140 Coils Coil 111 137 - -
Eupl07g01505 140 MobiDBLite consensus disorder prediction 103 140 - -
Eupl07g01505 140 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 10 109 IPR040107 GO:0000398|GO:0005681
Eupl07g01505 140 FunFam Zinc finger matrin-type protein 2 75 112 - -
Eupl07g01505 140 SUPERFAMILY beta-beta-alpha zinc fingers 80 118 IPR036236 -
Eupl07g01505 140 MobiDBLite consensus disorder prediction 22 43 - -
Eupl07g01505 140 Pfam Zinc-finger of C2H2 type 84 108 - -
Eupl07g01505 140 ProSitePatterns Zinc finger C2H2 type domain signature. 86 108 IPR013087 -
Eupl07g01505 140 Gene3D Classic Zinc Finger 78 124 - -
Eupl07g01505 140 SMART ZnF_U1_5 81 116 IPR003604 GO:0003676|GO:0008270
Eupl07g01505 140 MobiDBLite consensus disorder prediction 22 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01505 Eupl-Chr7 36531165 36536610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01505 4 108 C2H2 Transcription Factor Family AT3G05760 78.095 7.40e-60 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01505 K12848 - msin:131225447 181.415