Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01503 ATGGGGAGAGCACCATGTTGTGAGAAAGTGGGATTGAAGAAAGGGAGATGGACAGATGAAGAAGATGAGATCTTGATGAAGTACATTCAAGCTAATGGAGAAGGGTCATGGAGGTCATTACCTAAGACTGCAGGTTTGCTAAGGTGTGGGAAGAGTTGCAGACTGAGGTGGATTAATTACTTAAGAGCTGACTTAAAGAGAGGGAACATCTCTCCTGAAGAGGAGGATCTAATCATTAAGTTGCATAATTCTTTGGGTAATAGGGTTCACTTTTACATGACACAGAGTACACCTAAAAAAGCTCCCGAGACTTGGATTCGGGATTTCAAGAATCCGATGGTTGTGATAGCACTGAGCAGGTGGTCTTTGATAGCTGGGAACCTACCAGGAAGAACAGATAATGAGATAAAGAACTACTGGAACTCTCATTTGAGTAGGAGGATTCATAGCTTCAGGACGCCCAGGGACGAAGCCCCACCGGTCTTCATGGATGGTGGGTGCAAGCCAAAAAGCGGTCAGACTAGCCGGGCAGCTATGAAGAAGAAGAAAAGCAATATACCTTCAAATGTAAAAATGTCATCAGAGGAAAGTAAGAAAGGTGGGGTAAGCACGCACATGCACACCCAAGAGAAGAAGACCCTGACTGGTGCCGATACAGGGCAAGATGTAGAGAGAGAAAGCATGGAATTGAACCCATATGAGGAAGGAAAGGACAGAGAAAACCTTCCTGTTCCAGGTCTTTATCAGGATAGTAGAGAGGGGGTGTTGGGTCCTAATGAAGAGAGCAAAAATGGGATGTTGGGACCATATGATGGGCTAGAGACAGGGATATTGTACCCTAATGACGTTATGGACAGTGGGATACTGGATCCAAATGAGATATTGACACTTAGTGAGGAGAGAGAAAATGGGGACATGGGGATTAGTGAAGAGGGAGAAAGTAGAATGTTGGGTTCAAATAAAGGGAAAACAAGTGAGGACGACAGAGAGAGTGGTGGTTCGATCAGCTTCAAGGGAAATGGAAATCAGAATGGTGGTTCGTACTCTTCTTCTTCAATGACTTGGTGTATTGAAGATGAACGGGTTGATTGGAATTGGCAGGGTGTTGTTGAAGATTTTAAGTTATGGAATGAAGGAGAGGAGATGATATTGCCTTGGTTATGGGAGAGTGATGACAGTGAAGAAGAACAGTGTCATAAAGGGGGAGGGGAGATGGTTGAGGAGTGTGAGAAACATAAGGCTTTGGTTGCTTGGCTTCTTTCTTGA 1266 0.4447 MGRAPCCEKVGLKKGRWTDEEDEILMKYIQANGEGSWRSLPKTAGLLRCGKSCRLRWINYLRADLKRGNISPEEEDLIIKLHNSLGNRVHFYMTQSTPKKAPETWIRDFKNPMVVIALSRWSLIAGNLPGRTDNEIKNYWNSHLSRRIHSFRTPRDEAPPVFMDGGCKPKSGQTSRAAMKKKKSNIPSNVKMSSEESKKGGVSTHMHTQEKKTLTGADTGQDVERESMELNPYEEGKDRENLPVPGLYQDSREGVLGPNEESKNGMLGPYDGLETGILYPNDVMDSGILDPNEILTLSEERENGDMGISEEGESRMLGSNKGKTSEDDRESGGSISFKGNGNQNGGSYSSSSMTWCIEDERVDWNWQGVVEDFKLWNEGEEMILPWLWESDDSEEEQCHKGGGEMVEECEKHKALVAWLLS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01503 421 Pfam Myb-like DNA-binding domain 67 144 IPR001005 -
Eupl07g01503 421 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Eupl07g01503 421 MobiDBLite consensus disorder prediction 316 333 - -
Eupl07g01503 421 MobiDBLite consensus disorder prediction 178 197 - -
Eupl07g01503 421 FunFam Myb transcription factor 11 84 - -
Eupl07g01503 421 ProSiteProfiles Myb-like domain profile. 62 144 IPR001005 -
Eupl07g01503 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Eupl07g01503 421 CDD SANT 16 61 IPR001005 -
Eupl07g01503 421 SUPERFAMILY Homeodomain-like 11 140 IPR009057 -
Eupl07g01503 421 MobiDBLite consensus disorder prediction 298 350 - -
Eupl07g01503 421 MobiDBLite consensus disorder prediction 155 224 - -
Eupl07g01503 421 Gene3D - 71 148 - -
Eupl07g01503 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 120 148 IPR017930 -
Eupl07g01503 421 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Eupl07g01503 421 MobiDBLite consensus disorder prediction 335 350 - -
Eupl07g01503 421 CDD SANT 71 144 IPR001005 -
Eupl07g01503 421 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 218 - -
Eupl07g01503 421 Gene3D - 11 67 - -
Eupl07g01503 421 SMART sant 13 63 IPR001005 -
Eupl07g01503 421 SMART sant 66 146 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01503 Eupl-Chr7 36510280 36513340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01503 1 370 MYB Transcription Factor Family AT5G49330 38.579 6.70e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl07g01503 Myb_DNA-binding 6.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01503 K09422 - nnu:104605119 370.163