Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01494 ATGGCAGAAAGCTCAATTCCAGCAAAGTCGTCGCCAGATGATGGATCTTCGGAAGAGTCGTCGGATCGAAGACCCGGTTCGGTACTGAAATTGTTTGGTTTTTCGGTGACAGAGCGCGATGAAGTCCCGGTTATATCAGAAAATAGAGAGAACAGAAAATTTGAGTGTCAGTATTGTCGTAGAGAATTCGCCAACTCTCAAGCACTAGGAGGTCACCAGAACGCACACAAGAAAGAGCGGCAAAGAGCGAAGCGGGCACAATTCAATAGTGGCCGTCGATTCGCAGCTGCTACACCGATTCTCAGCCAACACGCAGTGAGATCAGGACCATTCTTTTATTCTAGTGGACCCACCAGCATTGGTGCTGCAGCTGCTGCTGCTCGGTTCCACTCACCGGCCGAGTACTACGCATCGCCACTACCGATGATGTCATCATCCCTTTCTCCTCGGGTTCCTTCTTGGTTTTATGTCCCGCGGCCAGCGACGTTTGCTGTTGCTGCTGACATGGGCCCCACTAACGCTCCGTCGAAAAATGAAGTGGATCTTGGACTTGATCTGCATCTGAGCCTTGCACCTTCTTCTACTCCATGA 591 0.5093 MAESSIPAKSSPDDGSSEESSDRRPGSVLKLFGFSVTERDEVPVISENRENRKFECQYCRREFANSQALGGHQNAHKKERQRAKRAQFNSGRRFAAATPILSQHAVRSGPFFYSSGPTSIGAAAAAARFHSPAEYYASPLPMMSSSLSPRVPSWFYVPRPATFAVAADMGPTNAPSKNEVDLGLDLHLSLAPSSTP* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01494 196 PANTHER ZINC FINGER PROTEIN 5 16 194 IPR044299 GO:0010090
Eupl07g01494 196 MobiDBLite consensus disorder prediction 1 26 - -
Eupl07g01494 196 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Eupl07g01494 196 FunFam Zinc finger protein 6 44 107 - -
Eupl07g01494 196 SUPERFAMILY beta-beta-alpha zinc fingers 51 81 IPR036236 -
Eupl07g01494 196 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Eupl07g01494 196 Gene3D Classic Zinc Finger 39 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01494 Eupl-Chr7 36410857 36414592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01494 27 192 C2H2 Transcription Factor Family AT1G67030 35.821 4.22e-21 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl07g01494 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01494 - - ming:122091292 217.624