Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01493 ATGCGGTTTTTCAATCAGACGTCATCATACTCGAGGGAAACATGGGGTTGGTTGACAATTACTAGAAGGGATTTCACCTGCCATCGTGGTGGCTATCCACAGAGAAAGCCACCAGATGATGGAAAATTACAAAGGAACCAAAAATCATCACGTTGTGGGTGCCAAGCATACATGCGAATTGTTAAGAAGGCAGATTTTAATATTCCCGAATGGCGTATTACGGGCTTTAGTAACATACACAACCACGACCTCTTGAAATCAAATGAAGTGCGTCTCTTTCCTGCCTATTGCACCATATCTGCAGATGACAAAAATCGCATTTGCATGTTTGCAAAAGCTGGAATATTGGTGCACCAAATGCTAAGATTGGTGGAGCTGGAGAAAGGTGTGAAGCTAGGTTCATTACCATTTACAGAAATAGATGTGAGAAACCTACTGCAATCCTTCAGAAATGTGGATCAGGATAATGACGTTATTGACCTCTTGCAATGTGCAAGAACATCAAGGATGAAGATCCCGAGTTCAAATACAAATTCAAGATGGATGCATATAACAGGCTGGAGCATATTGCCTGGTAAAAAATGTAGTGGGCATATATGA 600 0.4133 MRFFNQTSSYSRETWGWLTITRRDFTCHRGGYPQRKPPDDGKLQRNQKSSRCGCQAYMRIVKKADFNIPEWRITGFSNIHNHDLLKSNEVRLFPAYCTISADDKNRICMFAKAGILVHQMLRLVELEKGVKLGSLPFTEIDVRNLLQSFRNVDQDNDVIDLLQCARTSRMKIPSSNTNSRWMHITGWSILPGKKCSGHI* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01493 199 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 142 - -
Eupl07g01493 199 MobiDBLite consensus disorder prediction 29 48 - -
Eupl07g01493 199 MobiDBLite consensus disorder prediction 29 46 - -
Eupl07g01493 199 Pfam FAR1 DNA-binding domain 9 85 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01493 Eupl-Chr7 36393420 36394019 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl07g01493 FAR1 5.6e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01493 - - vvi:100264096 269.626