Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01485 ATGAATCAGGAAGAAGGATCCAATGGTTCCTGTTACTACTCCATCCTCGGGATTCGTAGGGACGCCTCCTCCACTGAAATCCGCGGCGCTTATCGGAAGCTCGCACTTAAATGGCATCCGGACAGGGGGGCGAGAAATCCAACCGTCGCTGGAGAAGCCAAACAGCGGTTTCAACAAATCCAGGAGGCATACTCAGTTCTGTCTGATAAAGGAAGGAGGTCAATGTACGACGCCGGATTGTACGATCCATTCGAAGAAGAGGACGAAGTCGGTATTTCTGGGTTTTCTGATTTCATGCAAGAAATGCTATCCATGATGGACAATGTCAGGCCCGAGGAGGATAGTTTTGAGGATCTTCAGAAAATGTTTGTGGAGATGGCAAGCGGAGGTAGCATCAAATTTGACGGCGATCTTGATCGAACGGGGGGGAAGAGGACACGTGTCACGGCTTCTCAAGGCAATAACGCGAAACGAACTACCTCTCGGGTCAGCGTATCCGTATCCGTATCTGATTGA 516 0.5 MNQEEGSNGSCYYSILGIRRDASSTEIRGAYRKLALKWHPDRGARNPTVAGEAKQRFQQIQEAYSVLSDKGRRSMYDAGLYDPFEEEDEVGISGFSDFMQEMLSMMDNVRPEEDSFEDLQKMFVEMASGGSIKFDGDLDRTGGKRTRVTASQGNNAKRTTSRVSVSVSVSD* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01485 171 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Eupl07g01485 171 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Eupl07g01485 171 PANTHER PUTATIVE, EXPRESSED-RELATED 1 146 - -
Eupl07g01485 171 Gene3D DnaJ domain 10 136 IPR036869 -
Eupl07g01485 171 PRINTS DnaJ domain signature 13 31 IPR001623 -
Eupl07g01485 171 PRINTS DnaJ domain signature 52 72 IPR001623 -
Eupl07g01485 171 PRINTS DnaJ domain signature 31 46 IPR001623 -
Eupl07g01485 171 MobiDBLite consensus disorder prediction 134 171 - -
Eupl07g01485 171 CDD DnaJ 11 69 IPR001623 -
Eupl07g01485 171 Pfam DnaJ domain 12 77 IPR001623 -
Eupl07g01485 171 MobiDBLite consensus disorder prediction 145 171 - -
Eupl07g01485 171 SMART dnaj_3 10 72 IPR001623 -
Eupl07g01485 171 SUPERFAMILY Chaperone J-domain 11 99 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01485 Eupl-Chr7 36332565 36334111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01485 7 78 C2H2 Transcription Factor Family AT1G74250 42.466 5.33e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01485 - - ming:122076316 255.373