Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01482 ATGATGGATCTGAGTGAAATAGGATCAGGGTCTGATGACATGAAGAAGACCTGTGCTGATTGCCAGACTACGAAAACTCCTCTATGGAGAGGTGGACCAGCTGGGCCTAAGTCTCTGTGTAATGCTTGTGGGATCAGAAACAGAAAGAAGAGGAGAGCTCTTCTGGGTCTGAACAAAGGAGGAGAGAAAGAGAGAAGAAGTAATAGCAACAAGCTAGGTGTGTCATGGAAGCTAAGATTGCTGGATTTGGGGGAAGAGATGGTGTTGAAGAGATCGGCGATAGAGAAACAGAGGAAGTTGGGAGAGGAAGAAGAAGCGGCCGTACTATTGATGGCTCTGTCTTGTGGGTTTGTTTATGCCTAA 363 0.4656 MMDLSEIGSGSDDMKKTCADCQTTKTPLWRGGPAGPKSLCNACGIRNRKKRRALLGLNKGGEKERRSNSNKLGVSWKLRLLDLGEEMVLKRSAIEKQRKLGEEEEAAVLLMALSCGFVYA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01482 120 ProSitePatterns GATA-type zinc finger domain. 18 43 IPR000679 GO:0006355|GO:0043565
Eupl07g01482 120 Gene3D - 13 102 IPR013088 GO:0006355|GO:0008270
Eupl07g01482 120 CDD ZnF_GATA 17 68 IPR000679 GO:0006355|GO:0043565
Eupl07g01482 120 PANTHER OS01G0976800 PROTEIN 12 119 - -
Eupl07g01482 120 Pfam GATA zinc finger 18 52 IPR000679 GO:0006355|GO:0043565
Eupl07g01482 120 ProSiteProfiles GATA-type zinc finger domain profile. 12 48 IPR000679 GO:0006355|GO:0043565
Eupl07g01482 120 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 11 52 - -
Eupl07g01482 120 SMART GATA_3 12 62 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01482 Eupl-Chr7 36291223 36292576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01482 12 120 C2C2-Gata Transcription Factor Family AT5G49300 66.667 5.81e-41 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Eupl07g01482 GATA 3.1e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01482 - - ming:122091090 167.548