Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01474 ATGATGAACATGGATAACGGAGGAGGAGGAGGAGCGATGTCCACAGCGAGCTCGGTTGCTAGCAGGAAAGCGAGTGATGGGGTCTCTGATCAGTTTCCAGCTGGTCTCCGGGTTCTGGTTGTTGACGATGATCCGACGTGCCTCAGGATCCTCGAGAAGATGCTTCAGAACTGTCTCTATGAAGTTACCACGTGTTCCCGGGCGGTGGTGGCTTTATCCATGCTTCGAGAAAGAAAATATGGATTTGATCTTGTTATAAGCGATGTCCACATGCCTGACATGGACGGATTTAAGCTCCTCGAACACATCGGGTTGGAGATGGACCTTCCCGTTATCATGATGTCAGTGGACGACAAAAAAGACGTTGTTATGAAGGGTGTCACACATGGAGCATGCGATTACCTGATCAAACCAGTTCGGATCGAGGCAATAAAAAATATATGGCAGCATGTGGTCCGAAAGAAGAGGAATGAATTGAAAGAATTGGAGCAATCAGGGAGCGTGGAGGATGGTGACAGACAGAGAAAACCATCTGACGATGCAGATTATGCATCCTCAGCAAATGAAGGAAGTTGGAGAATCTCAAAAAGGAGGAAGGAAGAGGAAGATGAGGTGGAGGAAAGGGATGATACTTCCACATTGAAGAAACCGCGGGTGGTCTGGTCAGTAGAGCTCCATCAACAATTCGTCGCAGCTGTGAACCAATTAGGCATTGATAAGGCTGTTCCAAAGAAAATTCTAGAACTGATGAATGTTCCTGGGCTCACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATATCGCCTGTATCTTAGAAGGCTCAGTGGAGTATCACAGCATCAGAGTGGTCTCAATGCGCCTTTTATGGGTTCCCCAGAAGCAAATTTTGGGCCAATATCATCCCTTGATGGGCTCGATCTCCAAGCTCTTGCTGTCTCTGGTCAACTCCCGCCACAGAGTCTCACTACATTACAGGCAGGACTTGCTAGGTCAACCACAAACACTGGCATAGGCATGCCACTTGTTGATCAGAGGAACCTTTTTGGTGCTGAAACATCAAAGGTAAGGTTTGGGGTGGGGCAACAACTAAGCAATAACAATAAACAAGTGAACTTACTTCACGGACTCCCAACAACCATGGAACCAAAGCAGCTAGCCCAATTACACCAGCCAGTCCTGCCATTCGGGAACATGGGTCTGCAAGTCAGTGAGGGAGCCTCGGGTTTCCTAAACTCATCAGCAATGTCTCAAGGAACGGCCTCATTGGCCCATGTGGATACTGTGCGTAGAAACCAGAGTAGCTCTCTAATGATGCAGATGGCTCAATCCCGGTCGAGGGGACAGTTGTTAAATGAAATTGCAGTTGGTCATTCTTCTGGGATTTCGTCGTCCATAGGGCAGCAAGTATTCTCAAATGAGATAGTGGATCAGGTCTTGGGAAGAAATGGGACTGTCATAAATGGTAGAGGTGCAGCGTTTAATTCAGTTTCCCAAGCTTCTACGATGGTTGATATTCCAATGAACCATGTTATGGAATTGCCTGTAAATGGTTTTCCTCTAGGTAGTACAGCAGGAGTATCTAGTCTCCAATCAACAGGGATGTTTCAAGATGGGGGAGGCTTGGAAGTAAAAGGAGGCTTTGCTCCAAGTTATGATATCTTTAATGAGCTTCGCCAGAGCAAAACCCAAGACTGGGAGTTACAGAATGTGGGTCTAACTTTTGACGCTACTCAACATGCCAACTCCATACAGAGAAATCTCAACCTCTCGCCAGCGATGTTGGGACATCAAGGCTTTGCATCTAGCCAAAAGAACGGACAAAACAGGAACGCATCTATTGTTGGCAAAGCAATGGCTCCCCTGAGAGAAGAAAATCAACATGGGAACTCAGAAAGCATTGTGCAACGCCATAATAACCTCCCAGTTGGCAATTCTTTCAGGGTAAAGGCTGAAAACATTCCTAATTTAAGCCGTGAGAACATGCTCCTTGCCGAACACTTTGGTCAGGATGATCTCATGAGTGCACTTCTCAAGCAGCAGCAAGAAGGGGTTGGAGCAGTTGAAGCTGAGTTTAACATTGATGGGTATACCATGGATAATATTCCAGTGTAG 2112 0.4659 MMNMDNGGGGGAMSTASSVASRKASDGVSDQFPAGLRVLVVDDDPTCLRILEKMLQNCLYEVTTCSRAVVALSMLRERKYGFDLVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSVDDKKDVVMKGVTHGACDYLIKPVRIEAIKNIWQHVVRKKRNELKELEQSGSVEDGDRQRKPSDDADYASSANEGSWRISKRRKEEEDEVEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSGLNAPFMGSPEANFGPISSLDGLDLQALAVSGQLPPQSLTTLQAGLARSTTNTGIGMPLVDQRNLFGAETSKVRFGVGQQLSNNNKQVNLLHGLPTTMEPKQLAQLHQPVLPFGNMGLQVSEGASGFLNSSAMSQGTASLAHVDTVRRNQSSSLMMQMAQSRSRGQLLNEIAVGHSSGISSSIGQQVFSNEIVDQVLGRNGTVINGRGAAFNSVSQASTMVDIPMNHVMELPVNGFPLGSTAGVSSLQSTGMFQDGGGLEVKGGFAPSYDIFNELRQSKTQDWELQNVGLTFDATQHANSIQRNLNLSPAMLGHQGFASSQKNGQNRNASIVGKAMAPLREENQHGNSESIVQRHNNLPVGNSFRVKAENIPNLSRENMLLAEHFGQDDLMSALLKQQQEGVGAVEAEFNIDGYTMDNIPV* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01474 703 Coils Coil 145 165 - -
Eupl07g01474 703 PIRSF RR_ARR_type-B 2 699 IPR017053 GO:0003677|GO:0003700|GO:0009736
Eupl07g01474 703 Pfam Response regulator receiver domain 38 146 IPR001789 GO:0000160
Eupl07g01474 703 SUPERFAMILY CheY-like 35 162 IPR011006 -
Eupl07g01474 703 Gene3D - 213 275 - -
Eupl07g01474 703 NCBIfam myb-like DNA-binding domain, SHAQKYF class 216 269 IPR006447 GO:0003677
Eupl07g01474 703 PANTHER TWO-COMPONENT RESPONSE REGULATOR 36 396 IPR045279 GO:0009736
Eupl07g01474 703 SUPERFAMILY Homeodomain-like 213 273 IPR009057 -
Eupl07g01474 703 FunFam Two-component response regulator 212 275 - -
Eupl07g01474 703 Pfam Myb-like DNA-binding domain 218 268 IPR001005 -
Eupl07g01474 703 FunFam Two-component response regulator 36 173 - -
Eupl07g01474 703 CDD REC_typeB_ARR-like 38 152 - -
Eupl07g01474 703 MobiDBLite consensus disorder prediction 192 213 - -
Eupl07g01474 703 ProSiteProfiles Response regulatory domain profile. 37 152 IPR001789 GO:0000160
Eupl07g01474 703 MobiDBLite consensus disorder prediction 163 213 - -
Eupl07g01474 703 SMART REC_2 36 148 IPR001789 GO:0000160
Eupl07g01474 703 MobiDBLite consensus disorder prediction 163 182 - -
Eupl07g01474 703 Gene3D - 36 170 - -
Eupl07g01474 703 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 215 272 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01474 Eupl-Chr7 36215073 36219080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01474 70 703 Response Regulator Gene Family AT3G16857 45.133 4.68e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Eupl07g01474 Response_reg 7.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01474 - K14491 nnu:104605149 961.829